DY304906

Overview
NameDY304906
Unique NameDY304906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1281
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT1A_HYDAT (Sodium/potassium-transporting ATPase subunit alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.419e-16
Identity = 47/137 (34.31%), Postives = 84/137 (61.31%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL 644
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +    +PL  + +L ++L  D + A++LA E     +M+R P   R P+   ++   L+  A  Q+ ++
Sbjct:  735 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIVYTLTSNIPEISPFLMFILFGIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRHP---RNPIRDKLVNERLISLAYGQIGMM 868          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATN5_YEAST (Sodium transport ATPase 5 OS=Saccharomyces cerevisiae GN=ENA5 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-15
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  237 ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAA---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 563
            A++G+AMGI G++V+KE+SDI++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATN2_YEAST (Sodium transport ATPase 2 OS=Saccharomyces cerevisiae GN=ENA2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-15
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  237 ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAA---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 563
            A++G+AMGI G++V+KE+SDI++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATN1_YEAST (Sodium transport ATPase 1 OS=Saccharomyces cerevisiae GN=ENA1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-15
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  237 ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAA---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 563
            A++G+AMGI G++V+KE+SDI++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATC3_SCHPO (Calcium-transporting ATPase 3 OS=Schizosaccharomyces pombe GN=cta3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-15
Identity = 49/165 (29.70%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDV-----PLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLL---VLNFQGKRILNLESDSXAH 704
            QA++G+AMG  G++VAK++SDI++ DDNF+S+V  +  GR ++ NI +F+   L  NV  +++  V      +V     P++ V++LW N+I  +  ++ L  E     +M+R P   +  +    +  ++++   +   V L   V+   G    NL  D  AH
Sbjct:  713 QANVGIAMGQNGSDVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNVGEVILLVVGLAFRDEVHLSVFPMSPVEILWCNMITSSFPSMGLGMELAQPDVMERLPHDNKVGIFQKSLIVDMMVYGFFLGVVSLMTWVVIMYGFGTGNLSYDCNAH 877          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATP4A_RABIT (Potassium-transporting ATPase alpha chain 1 OS=Oryctolagus cuniculus GN=ATP4A PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.653e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 593
            +ADIG+AMGI G++ AK ++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  L    +    S  +PL  + +L++ L  D   +++LA E     +M   P   +   + N
Sbjct:  738 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 857          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATP4A_PIG (Potassium-transporting ATPase alpha chain 1 OS=Sus scrofa GN=ATP4A PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.653e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 593
            +ADIG+AMGI G++ AK ++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  L    +    S  +PL  + +L++ L  D   +++LA E     +M   P   +   + N
Sbjct:  737 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 856          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATP4A_MOUSE (Potassium-transporting ATPase alpha chain 1 OS=Mus musculus GN=Atp4a PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.653e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 593
            +ADIG+AMGI G++ AK ++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  L    +    S  +PL  + +L++ L  D   +++LA E     +M   P   +   + N
Sbjct:  736 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 855          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATP4A_HUMAN (Potassium-transporting ATPase alpha chain 1 OS=Homo sapiens GN=ATP4A PE=2 SV=5)

HSP 1 Score: 84.3445 bits (207), Expect = 1.653e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 593
            +ADIG+AMGI G++ AK ++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  L    +    S  +PL  + +L++ L  D   +++LA E     +M   P   +   + N
Sbjct:  738 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 857          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ATP4A_CANFA (Potassium-transporting ATPase alpha chain 1 OS=Canis familiaris GN=ATP4A PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.653e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 593
            +ADIG+AMGI G++ AK ++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  L    +    S  +PL  + +L++ L  D   +++LA E     +M   P   +   + N
Sbjct:  737 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 856          
The following BLAST results are available for this feature:
BLAST of DY304906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AT1A_HYDAT7.419e-1634.31Sodium/potassium-transporting ATPase subunit alpha... [more]
ATN5_YEAST1.265e-1541.23Sodium transport ATPase 5 OS=Saccharomyces cerevis... [more]
ATN2_YEAST1.265e-1541.23Sodium transport ATPase 2 OS=Saccharomyces cerevis... [more]
ATN1_YEAST1.265e-1541.23Sodium transport ATPase 1 OS=Saccharomyces cerevis... [more]
ATC3_SCHPO1.265e-1529.70Calcium-transporting ATPase 3 OS=Schizosaccharomyc... [more]
ATP4A_RABIT1.653e-1535.83Potassium-transporting ATPase alpha chain 1 OS=Ory... [more]
ATP4A_PIG1.653e-1535.83Potassium-transporting ATPase alpha chain 1 OS=Sus... [more]
ATP4A_MOUSE1.653e-1535.83Potassium-transporting ATPase alpha chain 1 OS=Mus... [more]
ATP4A_HUMAN1.653e-1535.83Potassium-transporting ATPase alpha chain 1 OS=Hom... [more]
ATP4A_CANFA1.653e-1535.83Potassium-transporting ATPase alpha chain 1 OS=Can... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AF11RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304906 ID=DY304906; Name=DY304906; organism=Citrus clementina; type=EST; length=1281bp
GGATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGAT
TCTACTTTGATATTTTATATTCTTACGTGAGAGTGTATTTAAAATTTCTG
TTTCATCGTCAATGTTTTTAAATCATCTGGACTACTAGAACAGTTTCGTA
TTGGAGTTAAACGAGTCAGGGTGGCCTGGCAACATGCACTAAATATGATA
TTATAGCTAACGGAATTAAGTCATTTTGAAGTTCAGGCAGACATTGGTCT
GGCAATGGGTATTCAAGGAACCGAGGTTGCTAAAGAGAGCTCAGATATTA
TTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGT
CGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAGCTTACTGT
CAATGTCGCAGCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGTG
ATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGAT
ACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGAT
GCAGAGGTCCCCAGTTGGTCGAAGAGAACCTCTTATAACTAATATAATGT
GGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGTC
CTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCNATGC
CCATTCCAACAAAGTAAAAAATACTCTGATATTCAATTCTTTTGTCCTTT
GCCAGGTTAGTAAATTATCANGGGATACAATAATTTGTTAAGTTGAGCTT
CTGTTTTGTGTAATTTTCGAGGGCAGCTTGATGCTGCTAGCATTGTCACT
GCTAGAAATGTTTTTTTTACGGGCATTTGTTGGGTTTGTACTGTCATAAA
ATTTGGATGGGCTGACAAACAGGTTAATTGTTTGAAAATGCAAATCTTTA
ATGGAATTTAATTGTTCCGAAAACCTGATGAAAAAAATTATTTTTTGGAA
GGATTTACTAAAAAACCTCCTTTTTTATTGGGGGATGAGGGGCAGTAAAA
CCTTGGTACCTTCCAATACATTTTCATTTCCTTTTTTTTTGGGGAAAAAG
GGTATTCCAACTACCACGCCATTTATTTGGGAAACCAAGGGAAAAATTTT
TTTCCCCCCCCTCTTTTCTCCCTTTACTCTACTTTTGGCCCCCCCCCCCT
CCTTTTTCCGTGGGGGGAGAAAGTGTTAAAAAACACTCCGTTCGCCGCCC
CCCCCACCCCCCCCCCCCTCCCCCTTTTCTT
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