DY304906

Overview
NameDY304906
Unique NameDY304906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1281
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: ECA2_ARATH (Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.911e-20
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3
Query:  237 ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            ADIG+AMGI GTEVAKE+SD+++ DDNF+++V  V  GRS+Y N++ FI++ ++ NV  ++  F+ A       +  VQLLWVNL+ D   A AL   P    +M++ P    + LI + +    L+  SY
Sbjct:  738 ADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADIDIMKKPPRKSDDCLIDSWVLIRYLVIGSY 868          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A3_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens GN=ATP2A3 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.911e-20
Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN-IMWRNLLI 617
            +A+IG+AMG  GT VAK ++++++ DDNFAS+V  V  GR++Y+N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M++ P   RE LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYSNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRSPREALISGWLFFRYLAI 840          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A3_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus GN=Atp2a3 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN-IMWRNLLI 617
            +A+IG+AMG  GT VAK ++++++ DDNFAS+V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M++ P   RE LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRNPREALISGWLFFRYLAI 840          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus GN=Atp2a1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 843          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_RANES (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rana esculenta GN=ATP2A1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 843          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_RABIT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Oryctolagus cuniculus GN=ATP2A1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 843          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus GN=Atp2a1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 843          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Homo sapiens GN=ATP2A1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 843          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A3_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus GN=Atp2a3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN-IMWRNLLI 617
            +A+IG+AMG  GT VAK ++++++ DDNFAS+V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M++ P   RE LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRNPREALISGWLFFRYLAI 840          
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_RABIT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Oryctolagus cuniculus GN=ATP2A2 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
The following BLAST results are available for this feature:
BLAST of DY304906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ECA2_ARATH2.911e-2041.22Calcium-transporting ATPase 2, endoplasmic reticul... [more]
AT2A3_HUMAN2.911e-2042.64Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_MOUSE4.965e-2042.64Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_RAT4.965e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_RANES4.965e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_RABIT4.965e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_MOUSE4.965e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_HUMAN4.965e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_RAT6.484e-2042.64Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_RABIT6.484e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AF11RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304906 ID=DY304906; Name=DY304906; organism=Citrus clementina; type=EST; length=1281bp
GGATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGAT
TCTACTTTGATATTTTATATTCTTACGTGAGAGTGTATTTAAAATTTCTG
TTTCATCGTCAATGTTTTTAAATCATCTGGACTACTAGAACAGTTTCGTA
TTGGAGTTAAACGAGTCAGGGTGGCCTGGCAACATGCACTAAATATGATA
TTATAGCTAACGGAATTAAGTCATTTTGAAGTTCAGGCAGACATTGGTCT
GGCAATGGGTATTCAAGGAACCGAGGTTGCTAAAGAGAGCTCAGATATTA
TTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGT
CGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAGCTTACTGT
CAATGTCGCAGCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGTG
ATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGAT
ACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGAT
GCAGAGGTCCCCAGTTGGTCGAAGAGAACCTCTTATAACTAATATAATGT
GGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGTC
CTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCNATGC
CCATTCCAACAAAGTAAAAAATACTCTGATATTCAATTCTTTTGTCCTTT
GCCAGGTTAGTAAATTATCANGGGATACAATAATTTGTTAAGTTGAGCTT
CTGTTTTGTGTAATTTTCGAGGGCAGCTTGATGCTGCTAGCATTGTCACT
GCTAGAAATGTTTTTTTTACGGGCATTTGTTGGGTTTGTACTGTCATAAA
ATTTGGATGGGCTGACAAACAGGTTAATTGTTTGAAAATGCAAATCTTTA
ATGGAATTTAATTGTTCCGAAAACCTGATGAAAAAAATTATTTTTTGGAA
GGATTTACTAAAAAACCTCCTTTTTTATTGGGGGATGAGGGGCAGTAAAA
CCTTGGTACCTTCCAATACATTTTCATTTCCTTTTTTTTTGGGGAAAAAG
GGTATTCCAACTACCACGCCATTTATTTGGGAAACCAAGGGAAAAATTTT
TTTCCCCCCCCTCTTTTCTCCCTTTACTCTACTTTTGGCCCCCCCCCCCT
CCTTTTTCCGTGGGGGGAGAAAGTGTTAAAAAACACTCCGTTCGCCGCCC
CCCCCACCCCCCCCCCCCTCCCCCTTTTCTT
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