DY304906

Overview
NameDY304906
Unique NameDY304906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1281
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Gallus gallus GN=ATP2A2 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_MAKNI (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+S+V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   +    Y
Sbjct:  710 KAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSPKEPLISGWLFFRYMAIGGY 840
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Gallus gallus GN=ATP2A1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  713 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRSPKEPLISGWLFFRYLAIGGY 843
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A1_BOVIN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.469e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRTPKEPLISGWLFFRYMAIGGY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A3_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.106e-19
Identity = 53/129 (41.09%), Postives = 84/129 (65.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN-IMWRNLLI 617
            +A+IG+AMG  GT VAK ++++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFSTIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKLPRNPKEPLISGWLFFRYLAI 840
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus GN=Atp2a2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.445e-19
Identity = 52/132 (39.39%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_PIG (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Sus scrofa GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.445e-19
Identity = 52/132 (39.39%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus GN=Atp2a2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.445e-19
Identity = 52/132 (39.39%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
[Close]
BLAST of DY304906 vs. ExPASy Swiss-Prot
Match: AT2A2_FELCA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Felis catus GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.445e-19
Identity = 52/132 (39.39%), Postives = 82/132 (62.12%), Query Frame = 3 
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842
The following BLAST results are available for this feature:
BLAST of DY304906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AT2A2_HUMAN6.484e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_CHICK6.484e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_MAKNI6.484e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_CHICK6.484e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_BOVIN8.469e-2040.15Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_CHICK1.106e-1941.09Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_RAT1.445e-1939.39Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_PIG1.445e-1939.39Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_MOUSE1.445e-1939.39Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_FELCA1.445e-1939.39Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AF11RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304906 ID=DY304906; Name=DY304906; organism=Citrus clementina; type=EST; length=1281bp
GGATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGAT
TCTACTTTGATATTTTATATTCTTACGTGAGAGTGTATTTAAAATTTCTG
TTTCATCGTCAATGTTTTTAAATCATCTGGACTACTAGAACAGTTTCGTA
TTGGAGTTAAACGAGTCAGGGTGGCCTGGCAACATGCACTAAATATGATA
TTATAGCTAACGGAATTAAGTCATTTTGAAGTTCAGGCAGACATTGGTCT
GGCAATGGGTATTCAAGGAACCGAGGTTGCTAAAGAGAGCTCAGATATTA
TTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGT
CGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAGCTTACTGT
CAATGTCGCAGCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGTG
ATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGAT
ACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGAT
GCAGAGGTCCCCAGTTGGTCGAAGAGAACCTCTTATAACTAATATAATGT
GGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGTC
CTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCNATGC
CCATTCCAACAAAGTAAAAAATACTCTGATATTCAATTCTTTTGTCCTTT
GCCAGGTTAGTAAATTATCANGGGATACAATAATTTGTTAAGTTGAGCTT
CTGTTTTGTGTAATTTTCGAGGGCAGCTTGATGCTGCTAGCATTGTCACT
GCTAGAAATGTTTTTTTTACGGGCATTTGTTGGGTTTGTACTGTCATAAA
ATTTGGATGGGCTGACAAACAGGTTAATTGTTTGAAAATGCAAATCTTTA
ATGGAATTTAATTGTTCCGAAAACCTGATGAAAAAAATTATTTTTTGGAA
GGATTTACTAAAAAACCTCCTTTTTTATTGGGGGATGAGGGGCAGTAAAA
CCTTGGTACCTTCCAATACATTTTCATTTCCTTTTTTTTTGGGGAAAAAG
GGTATTCCAACTACCACGCCATTTATTTGGGAAACCAAGGGAAAAATTTT
TTTCCCCCCCCTCTTTTCTCCCTTTACTCTACTTTTGGCCCCCCCCCCCT
CCTTTTTCCGTGGGGGGAGAAAGTGTTAAAAAACACTCCGTTCGCCGCCC
CCCCCACCCCCCCCCCCCTCCCCCTTTTCTT
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