DY304920

Overview
NameDY304920
Unique NameDY304920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1267
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 1.276e-12
Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = -1
Query:  437 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAA 598
            P  G G+NPAR FG A++  +   W   W++W+GPF+GA +A   ++Y++  +A
Sbjct:  197 PFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLVIPSA 247          

HSP 2 Score: 42.3578 bits (98), Expect = 1.276e-12
Identity = 36/102 (35.29%), Postives = 48/102 (47.06%), Query Frame = -2
Query:  643 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPL 945
            +N   T G  LG ++SLI A  Y +AQ LGA+     ++L       R  G A  LA G      +  E   TF L+Y  ++   DPKR     HV  +APL
Sbjct:   89 VNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGG--MRPPGFA--LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPL 182          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 1.662e-12
Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = -1
Query:  446 ITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 595
            ++G  +NPARSFG AV+   +  W   W++WVGP  G  +A   ++ I +
Sbjct:  186 LSGASMNPARSFGPAVV---QGVWTYHWVYWVGPIAGGLLAGIIYRLIFK 232          

HSP 2 Score: 46.2098 bits (108), Expect = 1.662e-12
Identity = 29/103 (28.16%), Postives = 50/103 (48.54%), Query Frame = -2
Query:  643 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGG--GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPL 945
            +N   TLG  +  ++S+++A  Y++ QC+GAI G   +K+  +      GG  G +      N    +  E + TF+LV+ V + +DP R       P+   L
Sbjct:   75 INPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALD---GVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGRQDIKGSAPLAVGL 174          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.636e-12
Identity = 36/102 (35.29%), Postives = 52/102 (50.98%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTG-LGA---EIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G F+G  ++L+   LY +AQ LG++  C  +K           GG    A G + G G L A   EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   84 VNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPI 177          

HSP 2 Score: 41.5874 bits (96), Expect = 3.636e-12
Identity = 15/45 (33.33%), Postives = 26/45 (57.78%), Query Frame = -1
Query:  458 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQ 592
            +G  +NPA +FG AV+      W + W++W GP +G  +A   ++
Sbjct:  194 SGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYE 235          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 3.636e-12
Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTG----LGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G  LG  ++L+   LY +AQ LG++  C F+  F         GG    A G + G G    L  EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   85 VNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-FLLSFAT-------GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPI 178          

HSP 2 Score: 42.743 bits (99), Expect = 3.636e-12
Identity = 16/47 (34.04%), Postives = 27/47 (57.45%), Query Frame = -1
Query:  452 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 592
            +G  +NPA +FG AV+      W + W++W GP IG  +A   + ++
Sbjct:  195 SGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 3.638e-12
Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G  LG +++++    Y +AQ LGAI G   V+         +G        G     G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   83 VNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPI 174          

HSP 2 Score: 46.2098 bits (108), Expect = 3.638e-12
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = -1
Query:  452 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 598
            P +G  +NPARSFG AV       + + WI+WVGP +G  +A   ++Y+
Sbjct:  189 PFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 7.965e-12
Identity = 34/100 (34.00%), Postives = 49/100 (49.00%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G F+G  ++L    LY +AQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   84 VNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVAC-FLLRFST------GGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176          

HSP 2 Score: 45.4394 bits (106), Expect = 7.965e-12
Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = -1
Query:  452 GTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 589
            G  +NPA SFG A++     +W+ QW++WVGP IG  +A   ++ +
Sbjct:  194 GASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 2.939e-11
Identity = 35/100 (35.00%), Postives = 49/100 (49.00%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G F+G  ++L    LY VAQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   84 VNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVAC-FLLRFST------GGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176          

HSP 2 Score: 42.3578 bits (98), Expect = 2.939e-11
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = -1
Query:  452 GTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 589
            G  +NPA SFG A++      W  QW++WVGP IG  +A   ++ +
Sbjct:  194 GASMNPAVSFGPALV---SWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 46.9802 bits (110), Expect = 4.953e-11
Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 945
            +N   T G  +G ++++I    Y +AQ LG+   C  +K          GG A   + +A G     G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   82 VNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-------GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPL 175          

HSP 2 Score: 42.3578 bits (98), Expect = 4.953e-11
Identity = 19/46 (41.30%), Postives = 26/46 (56.52%), Query Frame = -1
Query:  461 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 598
            P +G  +NPARSFG AV       +   W++WVGP IG  +A   +
Sbjct:  190 PFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 8.325e-11
Identity = 19/51 (37.25%), Postives = 33/51 (64.71%), Query Frame = -1
Query:  449 PITGTGINPARSFGAAVI-YNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 598
            P  G  +NPAR+FG A++ +N    W   W++W+GP IGA +A   +++++
Sbjct:  198 PFDGAAMNPARAFGPALVGWN----WRHHWVYWLGPLIGAGMAGALYEFVM 244          

HSP 2 Score: 41.2022 bits (95), Expect = 8.325e-11
Identity = 30/101 (29.70%), Postives = 45/101 (44.55%), Query Frame = -2
Query:  655 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGAN----ELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 945
            +N   T G  +GR++S   A LY  AQ LGA+     ++L          GG       L    ++   L  E++ TF LVYTV++    +RS      P+
Sbjct:   91 VNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAPL 183          
The following BLAST results are available for this feature:
BLAST of DY304920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
TIP31_ORYSJ1.276e-1238.89Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQP_DROME1.662e-1238.00Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP11_ARATH3.636e-1235.29Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ARATH3.636e-1235.29Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP22_ORYSJ3.638e-1232.65Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP11_ORYSJ7.965e-1234.00Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE2.939e-1135.00Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP21_ARATH4.953e-1132.67Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP32_ORYSJ8.325e-1137.25Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BB03RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304920 ID=DY304920; Name=DY304920; organism=Citrus clementina; type=EST; length=1267bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGG
ATGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTG
CCAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCA
GAGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAG
TCCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCAT
ACCTGTTGTATTATGAATTTTGGAAAAGCTTCACAAACCCACAACCACAG
ATTGCACCCAAGCACTGTGCTACCATGTACAAAAAAGCCTCGATGAGCGA
CACCTTGCGCCCCAAGAACGTTCCCAATGTTCCAACCCGGTTTAAAATGT
CCACCAAAAAAACCGGCTGTGCATTTAACAAAAAAGGAAAATAGGCCCCC
AAAGGGCCAACCGAAGCCCAAAAAGGCCCACCCCCCCAAACTGAATCGGA
ATTCAAGGTTGGAAATCTGTTCCGGCCCTTTGGAACCCAATCAAAATAAA
AAAAACGGTAACCATAAAAAAAAAAAAAAACCGTTTAGCGATTAAAACCC
AAAAACATATTACCCCCCTCTTGATAAAAAGAACCCACATTTTTCCCCCC
TACCCCCCTCCCGAAAAAACCTAAATCTCGCCGCGGCGCCCCCCCGGGGG
GGGGAGAGGGGGGGGGG
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