DY304955

Overview
NameDY304955
Unique NameDY304955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1120
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.040e-43
Identity = 90/159 (56.60%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFG 828
            SK  NP VFFD+   G+P GRI+MELF+++ P+TAENFRALCTGEKG G       +K S FHRV+P F+CQ            +SIYG  F DENF  KHTGPG+LSMAN G  TN SQFF+   K E LD KHVVFG V +GMD V+ IE  GS  G
Sbjct: 2888 SKDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKG 3039          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 2.040e-43
Identity = 88/158 (55.70%), Postives = 110/158 (69.62%), Query Frame = 1
Query:  337 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIE 807
            S + Q+   NP VFFD+ +GG+P GR+ +ELFADVTPRTAENFR  CTGE    + G+P  YKGS FHRVI  FM Q             +IYG+  F+DENF  +H  PG+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQV++GMD+V+ IE
Sbjct:    6 SAVPQTTSSNPIVFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIE 162          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.664e-43
Identity = 94/178 (52.81%), Postives = 113/178 (63.48%), Query Frame = 1
Query:  346 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTT--SPS*SLNAVNC 870
            + +K PNP VFFD+T+GG+  GRI MELF  +TPRTAENFR  CTGE      G+P  YK S FHRVI  FM Q             +IYG+  F DENF+ KH  PG+LSMAN+GP TNG QFF+ T  T +L+ KHVVFGQVVEGMDVV+ IE       RTT   P+  +  + C
Sbjct:    7 SSAKTPNPVVFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIENT-----RTTRDKPNQDVTIIQC 178          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 3.479e-43
Identity = 91/159 (57.23%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFG 828
            SK  NP VFFD+   G+P GRI MELF+++ PRTAENFRALCTGEKG G       +K S FHRVIP F+CQ            +SIYG  F DENF  KHTGPG+LSMAN G  TN SQF +   K E LD KHVVFG V +GMD V+ IE  GS  G
Sbjct: 3059 SKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKG 3210          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.935e-43
Identity = 86/149 (57.72%), Postives = 106/149 (71.14%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEK 810
            K +FD+++GG+PAGR+V E+++DVTP+TAENF  LC G+ G    K G PL Y+GS FHRVI GFMCQ            ESIYG  F DENF +KH  P +LSMANAGP TNGSQ F+  A T  LDGKHVVFG+V++G  VV+AIE+
Sbjct:    6 KTYFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQGKRVVRAIER 154          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.462e-43
Identity = 87/146 (59.59%), Postives = 100/146 (68.49%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIE 807
            KV+FD+  G +  GRIV+ L+ +V P+T ENFRAL TGEKG G       YK S FHRVI  FM Q            +SIYG  FADENF  +HTGPGILSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EGMDVV AIE
Sbjct:   31 KVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIE 169          

HSP 2 Score: 21.9422 bits (45), Expect = 7.462e-43
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  840 PVVIAECGQL 869
            PV+IA+CG+L
Sbjct:  182 PVIIADCGEL 191          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.751e-43
Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  343 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIE 807
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.751e-43
Identity = 84/151 (55.63%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSS 822
            K+FFD+ +GG+ AGRIV+ LF D  P+T ENF+ L TG KG G       Y+GS FHR+IP FM Q             SIYGS F DE+F  KH GPG+LSMANAGP TNGSQFF+CT  T WLD +HVVFG V+EG+DVV+ +E   +S
Sbjct:   83 KIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETS 226          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.012e-42
Identity = 91/149 (61.07%), Postives = 103/149 (69.13%), Query Frame = 1
Query:  364 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIE 807
            NP VFFD+ +GG P GRI MELFADVTPRTAENFR  CTGE      GKP  YK S FHRVI  FM Q             +IYG+  FADENFV KH   G+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQVV+GMD+V+ IE
Sbjct:   13 NPIVFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIE 160          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.322e-42
Identity = 90/168 (53.57%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTSPS*SLNAVNC 870
            P VFFD+++G  PAGRI MELF D+TP+TAENFR LCTGE  I  +  P  YK ++FHRVIP FM Q             SIYG+ F DENF  KHTGPG+LSMAN+GP TNG QFF+ TA  E+LDGKH VFG+V++G+  V+ IE V +  G    P   +    C
Sbjct:   13 PIVFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPT--GANNRPKLQVRIAEC 176          
The following BLAST results are available for this feature:
BLAST of DY304955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
RBP2_MOUSE2.040e-4356.60E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPIH_EMENI2.040e-4355.70Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIH_ASPOR2.664e-4352.81Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
RBP2_HUMAN3.479e-4357.23E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPID_ASHGO5.935e-4357.72Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIB_ORPSP7.462e-4359.59Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIH_MOUSE7.751e-4354.19Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
CYPB_VICFA7.751e-4355.63Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIH_ASPFU1.012e-4261.07Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_CRYNE1.322e-4253.57Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BH05RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304955 ID=DY304955; Name=DY304955; organism=Citrus clementina; type=EST; length=1120bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGG
AAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCCAGGC
CATCGAGAAAGTGGGGTCCAGCTTCGGAAGGACCACAAGCCCGTCGTGAT
CGCTGAATGCGGTCAATTGTCTTAAATTTGATCATGATAATGGATCGCAT
CACCCGAACCGTCCGATCGCGATCGTGATGGTGATTATGTTATCTATATT
AAAGTGGCCGTGGCCTGAGGACTTTTAATCTTTACCTAATTTTCCCGGCT
TGTACTTGGTCGGGGTGGGAACGGGCCCCCGGGGGGTGGTTCTGAAGGAA
AGGGTTTTTTTTGTCTTTCCTAAGAAACCTCCCTTTTTAAAAAAAAAAGG
GGCCTTTTCTTTGTTATATT
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