DY304994

Overview
NameDY304994
Unique NameDY304994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1267
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: ATC1_ANOGA (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=3 SV=5)

HSP 1 Score: 92.0485 bits (227), Expect = 7.797e-18
Identity = 50/132 (37.88%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 629
            +A+IG+AMG  GT VAK ++++++ DDNF+S+V  V  GR++Y N+++FI++ ++ N+  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P    E LI+  ++   +    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKADEGLISGWLFFRYMAIGGY 842          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A_TORCA (Sodium/potassium-transporting ATPase subunit alpha OS=Torpedo californica PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.018e-17
Identity = 50/140 (35.71%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    V  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  726 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIANVPLPLGTVTILCIDLGTDMVPAISLAYERAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 862          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_XENLA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Xenopus laevis GN=atp1a1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.018e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  729 KADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 865          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_SHEEP (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Ovis aries GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_RABIT (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Oryctolagus cuniculus GN=ATP1A1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  727 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 863          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_PIG (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Sus scrofa GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNEQLISMAYGQIGMIQAL 861          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  727 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 863          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_HORSE (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A1_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bos taurus GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of DY304994 vs. ExPASy Swiss-Prot
Match: AT1A2_CHICK (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Gallus gallus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.737e-17
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  234 QADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 653
            +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++  L
Sbjct:  721 KADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP---RNPRTDKLVNERLISMAYGQIGMIQAL 857          
The following BLAST results are available for this feature:
BLAST of DY304994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ATC1_ANOGA7.797e-1837.88Calcium-transporting ATPase sarcoplasmic/endoplasm... [more]
AT1A_TORCA1.018e-1735.71Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_XENLA1.018e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_SHEEP1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_RABIT1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_PIG1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HUMAN1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HORSE1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_BOVIN1.330e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_CHICK1.737e-1735.00Sodium/potassium-transporting ATPase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DB03RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304994 ID=DY304994; Name=DY304994; organism=Citrus clementina; type=EST; length=1267bp
GGATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGAT
TCTACTTTGATATTTTATATTCTTACGTGAGAGTGTATTTAAAATTTCTG
TTTCATCGTCAATGTTTTTAAATCATCTGGACTACTAGAACAGTTTCGTA
TTGGAGTTAAACGAGTCAGGGTGGCCTGGCAACATGCACTAAATATGATA
TTATAGCTAACGGAATTAAGTCATTTTGAAGTTCAGGCAGACATTGGTCT
GGCAATGGGTATTCAAGGAACCGAGGTTGCTAAAGAGAGCTCAGATATTA
TTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGT
CGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAGCTTACTGT
CAATGTCGCAGCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGTG
ATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGAT
ACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGAT
GCAGAGGTCCCCAGTTGGTCGAAGAGAACCTCTTATAACTAATATAATGT
GGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGTC
CTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCAATGC
CCATTCCAACAAAGTAAAAAATACTCTGATATTCAATTCTTTTGTCCTTT
GCCAGGTTAGTAAATTATCAGGGAATACAATAATTTGTTAAGTTGAGCTT
CTGTTTGTTGTAGTTTCGAGGGCAGCTTGATGCTGCTAGCATTGTCACTG
CTAAAAGTGTTTTTTTTACCGGCATTGTTGGGTTTGTACTGTCATAAAAT
TGGATGGCCTGACAAACAGGTAATTGTTTTGAATGGCAGATCTTTAATGA
ATTTTAATGCTTCGAAAGCCTGATGAAAAAAAATATTTTCGGAAGAATTA
CTAAAAACCCTTCTTTTTTTGGGGGATATTGGCATTAACCCCTGGTAATT
CACAAACTTTAAATTTCATTTTTTTTGGGAAAGGTTTGGTTTCAACTAAC
CAGGGCTTATATTGGGAAACACATGGGAATTTTTTTTCCTTTTGTCTCCT
TTGTCCTTTTCTCTTATTGTGGCGCCCCCCTCCCCCTTATTTTTTTGGGG
GAAAAAATATTAAAAATAACCTTGTTTGCTCCACGACAACCTCCTCCCTC
CCCTTTTCAATTTTAAA
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