DY305005

Overview
NameDY305005
Unique NameDY305005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1239
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: EPHA3_HUMAN (Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 5.609e-13
Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = 2
Query:  368 FVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQL----VAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIAL--GVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPE 895
            +V+ +  + P +    +  +    N S + ++G G + EV  GRL+        VAIK L  G  ++   DFL E  IM   DHPN  +L G   +   + IV E   NGSL S L   K   ++ +   + +  G+A G+ YL +      +HRD+ A +IL+  +   ++ DFGL++ L +
Sbjct:  596 YVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 773          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 58/191 (30.37%), Postives = 102/191 (53.40%), Query Frame = 2
Query:  461 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            IG G Y  V  G+ +N   VA+K+  +   DE  + +F +E+  ++ + HP+   ++G  ++   + IV E   NGSL +++   K +  W ++ K+    A G+ YLH      IIHRDIK ++IL+ +    +I DFG  +   E    +++    GT  + APE ++ GE   +K   F+FG+++ E+
Sbjct: 1400 IGVGSYGIVNMGKWKNIN-VAVKKFVKQKIDEKQMLEFRAEIAFLSQLRHPHIILMIGACLKRPNICIVTEFMGNGSLRNVIKTTKPE--WKLKIKMLYQTALGIGYLHNS-DPIIIHRDIKPSNILVDDSMNVKIADFGFARIKEE----NSVMTRCGTPCWTAPE-IIRGEKYTEKVDVFSFGIVMWEV 1581          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 59/206 (28.64%), Postives = 104/206 (50.49%), Query Frame = 2
Query:  419 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTA-DEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            +L    N   F   IG G   EV +   + G  VA+K + +     +   +F  E+ I+  + HPN    +G  +  G + I+ E    GSL  +L  M K +L   ++ K+ + VA+G+ YLH      IIHRD+K+ ++L+  +F  ++ DFGL++++       +     GT  ++APE + +G     K   ++FG+++ EI
Sbjct:  352 KLNIQENELLFIKKIGSGACGEVCQYEWK-GTPVAVKTIFKSLLRKDKKEEFEKEVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKSELSLSVKVKMLIDVAQGMNYLHT-YSPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFI-SGGIGSSAKTFCGTLSWIAPE-VFNGSGYTTKVDVYSFGIVLWEI 553          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 63/222 (28.38%), Postives = 106/222 (47.75%), Query Frame = 2
Query:  398 QKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL----TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREIGQG 1036
            Q ++++ +L  A+       L+G+G     YK  L N  +V +KRL    T  T++E    F + + I+  + H N   +  Y    G  +++ +  PNGSL +L++G +      L W    KIA  VA+GL Y+H+     ++H ++K+ +ILL +DFE  + D+ L+       +         +  Y APE          K   ++FGVLI E+  G
Sbjct:  383 QGMYTMEQLMRAS-----AELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEA---FENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQ-TSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTD---SSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTG 592          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SVKA_DICDI (Serine/threonine-protein kinase svkA OS=Dictyostelium discoideum GN=svkA PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  461 IGKGGYAEVYKG-RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREIGQGSP 1042
            IGKG + EV+KG   +  + +AIK +    A++ I D   E+ +++  + P   K  G  ++G  + I++E    GS+  L+         G    I   + +GL YLH   +   IHRDIKAA++LL+   + ++ DFG++  L +Q T    +   GT  ++APE +        K   ++ G+   E+ +G P
Sbjct:   18 IGKGSFGEVFKGINKKTNETIAIKTIDLEDAEDEIEDIQQEINVLSQCESPFVTKYFGSFLKGSKLWIIMEYLAGGSVLDLM--KPGPFDEGYIAIILRELLKGLEYLHSEGK---IHRDIKAANVLLSASGDVKLADFGVSGQLTDQMTKR--NTFVGTPFWMAPEVIKQTGYD-SKADIWSMGITALEMAKGEP 205          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: ROS_AVISU (Tyrosine-protein kinase transforming protein ros OS=UR2 sarcoma virus GN=V-ROS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 65/216 (30.09%), Postives = 104/216 (48.15%), Query Frame = 2
Query:  437 NNFSFENLIGKGGYAEVYKGR----LRNGQ---LVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYG-IEGGMHIVLELSPNGSLASLLYGMKEK------LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE------DFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIRE 1024
            +  +   L+G G + EVY+G     L +G     VA+K L RG  D+  ++FL E  +M+  DHP+  KLLG   +    +++LEL   G L S L G +++      L       I L + +G +YL    + R IHRD+ A + L++E          +I DFGL + + +   +    +      ++APE L+ G         +AFGVL+ E
Sbjct:   96 DKLNLHKLLGSGAFGEVYEGTALDILADGSGESRVAVKTLKRGATDQEKSEFLKEAHLMSKFDHPHILKLLGVCLLNEPQYLILELMEGGDLLSYLRGARKQKFQSPLLTLTDLLDICLDICKGCVYLE---KMRFIHRDLAARNCLVSEKQYGSCSRVVKIGDFGLARDIYKNDYYRKRGEGLLPVRWMAPESLIDGVFT-NHSDVWAFGVLVWE 307          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: PLK4_DROME (Serine/threonine-protein kinase PLK4 OS=Drosophila melanogaster GN=SAK PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 2
Query:  440 NFSFENLIGKGGYAEVYKGR-LRNGQLVAIK----RLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPE 955
            ++  ++L+GKGG+A VYK R L   Q VAIK    +L +GT   +      E+ I + + HP+  +L  +  +   +++VLEL+ NG L   +  +           I   V  GLLYLH      I+HRDI  +++LL+ +   +I DFGL   L      H    + GT  Y++PE
Sbjct:   13 DYEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTG--LTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIARPFTETEAASILKQVVAGLLYLHS---HNIMHRDISLSNLLLSREMHVKIADFGLATQLKRPDERH--MTMCGTPNYISPE 183          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: LIMK2_CHICK (LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 69/263 (26.24%), Postives = 125/263 (47.53%), Query Frame = 2
Query:  314 SIRRSSSMRE--GIDMPRNLFVNSYD---SQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR-NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISK------------------VGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            S+RRS+S+ +  G   P+   + S D   S+S +   S  +      +     ++GKG + +  K   +  G+++ +K L R   +E    FL+E+ +M  +DHPN  K +G   +   ++++ E    G+L   L    +   W  +   A G+A G+ YLH  C   IIHRD+ + + L+  D    + DFGL++ + E+    T+ K                  V G   ++APE +++G+   +    F+FG+++ EI
Sbjct:  283 SLRRSNSISKSPGPSSPKEPLLLSRDISRSESLRSSSSCSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIR-CDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRNA-DPFPWQQKVSFAKGIASGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKKPTLEKPSAKKRTLRKSDRKKRYTVVGNPYWMAPE-MLNGQSYDETVDIFSFGIVLCEI 539          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: LIMK1_RAT (LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 56/207 (27.05%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  458 LIGKGGYAEVYKGRLRN-GQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWL---------------PEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            ++GKG + +  K   R  G+++ +K L R   +E    FL E+ +M  ++HPN  K +G   +   ++ + E    G+L  ++  M  +  W  R   A  +A G+ YLH      IIHRD+ + + L+ E+    + DFGL + +               P++   +T+  VG  + ++APE +++G    +K   F+FG+++ EI
Sbjct:  344 VLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKGQSEDLRSLKKPDRKKRYTV--VGNPY-WMAPE-MINGRSYDEKVDVFSFGIVLCEI 542          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: LIMK1_MOUSE (LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 56/207 (27.05%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  458 LIGKGGYAEVYKGRLRN-GQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWL---------------PEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            ++GKG + +  K   R  G+++ +K L R   +E    FL E+ +M  ++HPN  K +G   +   ++ + E    G+L  ++  M  +  W  R   A  +A G+ YLH      IIHRD+ + + L+ E+    + DFGL + +               P++   +T+  VG  + ++APE +++G    +K   F+FG+++ EI
Sbjct:  344 VLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKNMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKNQSEDLRSLKKPDRKKRYTV--VGNPY-WMAPE-MINGRSYDEKVDVFSFGIVLCEI 542          
The following BLAST results are available for this feature:
BLAST of DY305005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA3_HUMAN5.609e-1330.05Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 ... [more]
YR818_MIMIV7.326e-1330.37Putative serine/threonine-protein kinase/receptor ... [more]
Y9871_DICDI7.326e-1328.64Probable serine/threonine-protein kinase DDB_G0271... [more]
Y5720_ARATH7.326e-1328.38Probable inactive receptor kinase At5g67200 OS=Ara... [more]
SVKA_DICDI7.326e-1329.08Serine/threonine-protein kinase svkA OS=Dictyostel... [more]
ROS_AVISU7.326e-1330.09Tyrosine-protein kinase transforming protein ros O... [more]
PLK4_DROME7.326e-1332.58Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
LIMK2_CHICK7.326e-1326.24LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2... [more]
LIMK1_RAT7.326e-1327.05LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 ... [more]
LIMK1_MOUSE7.326e-1327.05LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305005 ID=DY305005; Name=DY305005; organism=Citrus clementina; type=EST; length=1239bp
GATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAG
AATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAA
TATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCT
TGAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAAC
CATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTA
TTCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTA
TCCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTG
ATATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAG
AAGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTT
CGAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTT
TGAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCA
GATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGT
CGATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCA
TGCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTT
TATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTT
AGGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAA
TCATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACTTC
GAGCCTCAGATTTGTGATTTTGGACTAACGAAATGGCTACCGGAGCAATG
GACTCATCACACAATATCAAAAGTTGGAGGCACATTTGGCTATCTTGCTC
CTGAGTTCTTAATGCATGGGGAAATTAGATGAAAAAAACCGACGTCTTTT
GCTTTCGGGGTATTAATACGGGAAATTGGTCAAGGAAGCCCCAGCTTTTG
AATTCCTCCCAACAAAGCCCTTGGTTTTATGGGGCAAGGCCCAAGGAAAA
AAAAAAGGAAAAAAAATTTAAAAAAGCCATTTTTTAAGGGCCTCCCCCCT
AAACCAGAAAAAAATAAACAAAAACCCCCCGGGGAAAAAGAAGAAAATCT
GGGGGGGGGGGTACTTTTTTGGGGGGGGGGCGCCCTTTC
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