DY305005

Overview
NameDY305005
Unique NameDY305005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1239
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  461 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            +G G + EVY+G   N   VA+K L  GT     A FL+E  IM  + HP   +L     +G  ++I+ EL   GSL   L G    LK      +A  VA G+ YL        IHRD+ A +IL+ ++   ++ DFGL + +     ++          + APE  +      K    ++FG+LI E+
Sbjct:  101 LGAGQFGEVYQGLWNNSTPVAVKTLKAGTMQP--AAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYLQGEAGALKLPQLIDMAAQVAAGMAYLE---LHNYIHRDLAARNILVGDNNICKVADFGLARLIVSD-DYNATEGAKFPIKWTAPEAALFNRFSIKSDV-WSFGILITEL 283          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: PKN2_CLOPE (Probable serine/threonine-protein kinase CPE1738 OS=Clostridium perfringens GN=CPE1738 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 61/210 (29.05%), Postives = 104/210 (49.52%), Query Frame = 2
Query:  437 NNFSFENLIGKGGYAEVYKGRLRN-GQLVAIKRLTRG--TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGM-HIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREIGQGSPSF 1048
            N +     +G+GG + VYK R R   + VA+K L       +EI+  F  E   +A++ +PN   +L  G +  + +IV+E     +L  ++   KEK  L + +   I + VA+ L   H+     IIHRD+K  +IL+TE+   ++ DFG+ K +      HT + V G+  Y +PE    G     +   ++ G+++ E+  G   F
Sbjct:    8 NRYELLQCVGEGGMSFVYKARCRKLNRFVAVKILKDEFKNNEEIVRRFKKEATAIANLSNPNVVNVLDVGTQDDINYIVMEYVEGKTLKDII---KEKGALPYEVAISIGIKVAKALECAHKS---GIIHRDVKPQNILVTEEGVVKVTDFGIAKSMDSSTIAHT-NSVMGSAHYFSPE-QAKGTYTDYRTDLYSLGIVLYEMVTGVVPF 209          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: MET_MOUSE (Hepatocyte growth factor receptor OS=Mus musculus GN=Met PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 2
Query:  449 FENLIGKGGYAEVYKGRL--RNGQLV--AIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI--EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTF--GYLAPEFLMHGEIR*KKPTSFAFGVLIREI-GQGSPSF 1048
            F  +IG+G +  VY G L   +G+ +  A+K L R T  E ++ FL+E  IM    HPN   LLG  +  EG   +VL    +G L + +                L VA+G+ YL     ++ +HRD+ A + +L E F  ++ DFGL + + ++  +   +K G      ++A E L   +    K   ++FGVL+ E+  +G+P +
Sbjct: 1078 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIEEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPY 1282          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: FAK1_CHICK (Focal adhesion kinase 1 OS=Gallus gallus GN=PTK2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  416 YELQSATNNFSFENLIGKGGYAEVYKGRLRNGQ----LVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPE 955
            YE+Q           IG+G + +V++G   + +     VAIK     T+D +   FL E   M   DHP+  KL+G   E  + I++EL   G L S L   K  L        A  ++  L YL     +R +HRDI A ++L++     ++ DFGL++++ E  T++  SK      ++APE
Sbjct:  415 YEIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 592          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: CDC5_ENCCU (Probable cell cycle serine/threonine-protein kinase CDC5 homolog OS=Encephalitozoon cuniculi GN=CDC5 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  443 FSFENLIGKGGYAEVYKGRLRNGQLVAIK--RLTRGTADEIIADFLSELGIMAHVDHPNTAKLL-GYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFL 961
            +  + L+G+G YA+ Y   + +G+  A+K  RL    + ++     SE+ I + +D+PN  K+   +     + +VLEL   G+L +LL     KLK     +      EGL+YLH      ++HRD+K  ++ L   F  +I DFGL+  + +     T+    GT  Y+APE L
Sbjct:   40 YMLKKLLGRGAYAQCYLAEIESGEQYAMKVVRLKDIKSRKVHEKLESEIAIHSKLDNPNVVKMYRSFRSSEYVFMVLELCERGALDALLK-RNGKLKERHVARFVKQTVEGLIYLHNSVS--VVHRDLKLGNLFLDSKFNVKIGDFGLSAVIKDGEKKVTMC---GTPNYIAPEVL 209          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: AURKB_PIG (Serine/threonine-protein kinase 12 OS=Sus scrofa GN=AURKB PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 63/215 (29.30%), Postives = 103/215 (47.91%), Query Frame = 2
Query:  437 NNFSFENLIGKGGYAEVYKGRLRNGQ-LVAIKRLTRGTADE--IIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIAL---GVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTIS----KVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREIGQGSPSF 1048
            ++F     +GKG +  VY  R +    +VA+K L +   ++  +      E+ I AH+ HPN  +L  Y  +   ++++LE +P G L    Y   +K +     + A     +A+ L+Y H    +++IHRDIK  ++LL    E +I DFG        W+ H  S     + GT  YL PE ++ G    +K   +  GVL  E+  G+P F
Sbjct:   75 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKCRTFDEQRTATIMEELADALIYCHG---KKVIHRDIKPENLLLGLQGELKIADFG--------WSVHAPSLRRKTMCGTLDYLPPE-MIEGRTHNEKVDLWCIGVLCYELLVGNPPF 273          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SRC_RSVPA (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain PA101T) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 2
Query:  461 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTF--GYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            +G+G + EV+ G       VAIK L  GT       FL E  +M  + H    +L     E  ++IV+E    GSL   L G M + L+     ++A  +A G+ Y+    +   +HRD++AA+IL+ E+   ++ DFGL + + +   +   ++ G  F   + APE  ++G    K    ++FG+L+ E+
Sbjct:  270 LGQGYFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAMVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVEMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARPGARFPVKWTAPEAALYGRFTIKSDV-WSFGILLTEL 452          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 57/195 (29.23%), Postives = 97/195 (49.74%), Query Frame = 2
Query:  452 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTF--GYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            E  +G+G + EV+ G   +   VAIK L  GT       FL E  +M  + H    +L     E  ++IV+E    GSL   L G M + L+      +A  +A G+ Y+    +   +HRD++AA+IL+ E+   ++ DFGL + + +   +   ++ G  F   + APE  ++G    K    ++FG+L+ E+
Sbjct:  270 EAKLGQGCFGEVWMGTWNDTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFGILLTEL 455          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SRC42_DROME (Tyrosine-protein kinase Src42A OS=Drosophila melanogaster GN=Src42A PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 61/202 (30.20%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  440 NFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTF--GYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            +  F   +G G + +V++G   N   VAIK L  GT D    DFL+E  IM  + H    +L     +E  ++I+ EL  +GSL   L    G    LK      +A  +A G+ YL     +  IHRD+ A ++L+ +    +I DFGL + + E       ++VG  F   + APE   + +   K    ++FG+L+ E+
Sbjct:  247 SLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDP--KDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLE---SQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKED---EYEARVGARFPIKWTAPEAANYSKFSIKSDV-WSFGILLTEL 439          
BLAST of DY305005 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 62/196 (31.63%), Postives = 106/196 (54.08%), Query Frame = 2
Query:  455 NLIGKGGYAEVYKGRLRNGQLVAIK--RLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGI--RYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTEDFEPQICDFGLTKWLPEQWTHHTISKVGGTFGYLAPEFLMHGEIR*KKPTSFAFGVLIREI 1027
            + +G+G +  VYKG+ R GQ VA+K  R  + +  E+ + F  E+ IM+ + HPN    LG   + G M IV EL     L  LL+  + K ++ +  R ++A   A G+ +LH     RI+H D+K A++L+  +   ++ DFG ++    +      +K  GT  ++APE +M G    +K   ++FG+++ EI
Sbjct:  281 DFLGQGSFGSVYKGKCR-GQEVAVKIPRKQKLSLYELTS-FRHEVKIMSKIFHPNVVLFLGACTQSGKMQIVTELCQT-DLEKLLHNDRTKKEFSLFRRMQMAKDAALGMNWLHG--ITRIVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQDKAAK--GTPLWMAPEVMM-GNPYNEKADVYSFGIILWEI 468          
The following BLAST results are available for this feature:
BLAST of DY305005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2_SPOLA1.632e-1231.05Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
PKN2_CLOPE1.632e-1229.05Probable serine/threonine-protein kinase CPE1738 O... [more]
MET_MOUSE1.632e-1229.67Hepatocyte growth factor receptor OS=Mus musculus ... [more]
FAK1_CHICK1.632e-1230.43Focal adhesion kinase 1 OS=Gallus gallus GN=PTK2 P... [more]
CDC5_ENCCU1.632e-1230.68Probable cell cycle serine/threonine-protein kinas... [more]
AURKB_PIG1.632e-1229.30Serine/threonine-protein kinase 12 OS=Sus scrofa G... [more]
SRC_RSVPA2.132e-1229.17Tyrosine-protein kinase transforming protein Src O... [more]
SRC_RSVP2.132e-1229.23Tyrosine-protein kinase transforming protein Src O... [more]
SRC42_DROME2.132e-1230.20Tyrosine-protein kinase Src42A OS=Drosophila melan... [more]
SHKD_DICDI2.132e-1231.63Dual specificity protein kinase shkD OS=Dictyostel... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305005 ID=DY305005; Name=DY305005; organism=Citrus clementina; type=EST; length=1239bp
GATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAG
AATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAA
TATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCT
TGAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAAC
CATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTA
TTCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTA
TCCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTG
ATATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAG
AAGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTT
CGAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTT
TGAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCA
GATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGT
CGATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCA
TGCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTT
TATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTT
AGGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAA
TCATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACTTC
GAGCCTCAGATTTGTGATTTTGGACTAACGAAATGGCTACCGGAGCAATG
GACTCATCACACAATATCAAAAGTTGGAGGCACATTTGGCTATCTTGCTC
CTGAGTTCTTAATGCATGGGGAAATTAGATGAAAAAAACCGACGTCTTTT
GCTTTCGGGGTATTAATACGGGAAATTGGTCAAGGAAGCCCCAGCTTTTG
AATTCCTCCCAACAAAGCCCTTGGTTTTATGGGGCAAGGCCCAAGGAAAA
AAAAAAGGAAAAAAAATTTAAAAAAGCCATTTTTTAAGGGCCTCCCCCCT
AAACCAGAAAAAAATAAACAAAAACCCCCCGGGGAAAAAGAAGAAAATCT
GGGGGGGGGGGTACTTTTTTGGGGGGGGGGCGCCCTTTC
back to top