DY305012

Overview
NameDY305012
Unique NameDY305012
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1033
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.719e-13
Identity = 61/176 (34.66%), Postives = 79/176 (44.89%), Query Frame = 2
Query:  176 LMLRIAWHSAGTY-DVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            L +R+AWH AGTY  V  + G   G  R A   A   N  LD A RLL P K+++   IS+ADLY LAG V +E +G     F  GR+D  EP  +    D K    H                                      +R  FG  MG++D++ VAL +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEGPNASGEPLSAAAAIRATFG-NMGMNDEETVALIAGGHTLGKTH 273          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.469e-13
Identity = 69/237 (29.11%), Postives = 92/237 (38.82%), Query Frame = 2
Query:  173 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYF 646
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D                                  +R+ FG +M ++D++ VAL +GGHT G+ H                                       SG EG WT  P  + + YF
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGLIYVNPEGPNGKPDPIAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGAASPDGNMGVEPEGEGLAAQGLGWINTHGTGNAGDTITSGLEGAWTSTPAEWSHGYF 435          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_PSEMY (Catalase-peroxidase OS=Pseudomonas mendocina (strain ymp) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.469e-13
Identity = 69/237 (29.11%), Postives = 96/237 (40.51%), Query Frame = 2
Query:  173 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRL--------PDAKQGND--HLRQVFGA-------------------------------QMGLSDKDIVAL-SGGHTLGRCH-----------------------------------KERSGFEGPWTRNPLIFDNSYF 646
            P  +R+AWHSAGTY     + GG  G  R A   +   N  +D + RLL P K+++  +IS+ADLY LAG V +E  G     F  GR+D  EP Q+            D K+ ND   L   FGA                               +M ++D++IVAL +GGHT G+ H                                      SG E  WT+ P ++ N++F
Sbjct:   84 PQFIRMAWHSAGTYRTTDGRGGGGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQSISWADLYILAGNVALESMGFRTFGFGAGREDVWEPDQDVNWGAEVAWLGVDPKRVNDERELTAPFGATHMGLIYVNPEGPNASGDYLAAAKDIRATFYRMAMNDEEIVALIAGGHTFGKAHGAAPESHKGPEPEGAPIEAQGLGWTSNFGSGFGKDTVSSGLEVTWTKTPALWSNNFF 320          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  164 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  164 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  164 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  164 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  164 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 580
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.707e-12
Identity = 68/235 (28.94%), Postives = 90/235 (38.30%), Query Frame = 2
Query:  176 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYF 646
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT G+CH                                      SG EG W  NP  +D  YF
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCHGAAPDSHLEAEPEGAALHEQGLGWRNTYESGKGEHTITSGIEGAWKPNPTRWDQGYF 322          
BLAST of DY305012 vs. ExPASy Swiss-Prot
Match: KATG_SALRD (Catalase-peroxidase OS=Salinibacter ruber (strain DSM 13855) GN=katG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.841e-12
Identity = 80/319 (25.08%), Postives = 112/319 (35.11%), Query Frame = 2
Query:  173 PLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------GRL----------------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYF--------------------------------XXXXXXXXXXXXXXPSDKALLDDPVFRPLVEKYAADEDAFLADYAEAHLQL 799
            PL +R++WH+AGTY      GG  G   RLA   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR+D  +P +             GR                             PD +     +R+ FG +M ++D++  AL +GGHT G+ H                                      SG EGPWT  P  +D  Y                                                +D AL  DP +R ++E +  + DAF   +A A  +L
Sbjct:   84 PLFIRMSWHAAGTYRTTDGRGGSSGGRQRLAPLNSWPDNANLDKARRLLWPVKQKYGRKISWADLLVLAGNVAMESMGFETFGFAGGREDDFKPDESIDWGPEDEMETWGRFNEEDELDNPLGATVMGLIYVNPEGPESTPDPEWSAQRIRKSFG-RMAMNDRETAALIAGGHTFGKVHGADTDEHLQAEPEAAPIEQQGLGWHNEHGSGKGGDTITSGIEGPWTDAPTEWDMGYLDFLLDYEWEVHKGPGGAWQWRPKSDELKGVVPDAHDASETVDPMMLTTDVALKRDPDYREIIEDFRENPDAFEDAFARAWFKL 401          
The following BLAST results are available for this feature:
BLAST of DY305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
KATG_ENT385.719e-1334.66Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
KATG_RHOBA7.469e-1329.11Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]
KATG_PSEMY7.469e-1329.11Catalase-peroxidase OS=Pseudomonas mendocina (stra... [more]
KATG_ACIBY1.664e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBT1.664e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBC1.664e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB51.664e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB31.664e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_SYNPW3.707e-1228.94Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG_SALRD4.841e-1225.08Catalase-peroxidase OS=Salinibacter ruber (strain ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE10RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305012 ID=DY305012; Name=DY305012; organism=Citrus clementina; type=EST; length=1033bp
TGCCGAATTCGGCACGAGGCTCGTTTGTTAAGGATTTGCGTCTCTCTTTC
TCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAGC
GAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCTT
CATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCACT
CAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAACC
ATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATAT
TGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCT
ACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGT
GGGCCCGATATCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGCCACC
TCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGC
AAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCTC
TCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGA
GGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGG
AGCTCTTGACTGGTGAGAANGATGGTCTTCTGCAATTGCCATCCGACAAG
GCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGC
GGATGAAGACGCTTTCCTCGCTGATTATGCTGAGGCTCATCTCCAGCTCT
CTGAGCTAGGATTTGCTGAAGCCTNATTTTACTGAGTAATAAATGGTTGG
GATGATGCCAACACAGTGTGCCTCTATTTTATGTTTTTTGAATCTCAGAA
AATCAAATTCAAGATGTGTTTGTGGAATTTTTTTGGTTTTTGTTTGTTGC
ACATGGTGGAATTGTGAAAAGTTGGGGCCAAAAATATTGGTTATTATCAC
CCCCTTAAAAAAAAAAATAATCAACGGGTTTTC
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