DY305085

Overview
NameDY305085
Unique NameDY305085
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1225
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: NTRK2_RAT (BDNF/NT-3 growth factors receptor OS=Rattus norvegicus GN=Ntrk2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  583 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 745          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: NTRK2_MOUSE (BDNF/NT-3 growth factors receptor OS=Mus musculus GN=Ntrk2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  583 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 745          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: NTRK2_HUMAN (BDNF/NT-3 growth factors receptor OS=Homo sapiens GN=NTRK2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  584 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 746          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: NTRK2_CHICK (BDNF/NT-3 growth factors receptor OS=Gallus gallus GN=NTRK2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  580 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 742          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: EPHA2_MACFA (Ephrin type-A receptor 2 OS=Macaca fascicularis GN=EPHA2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 67/246 (27.24%), Postives = 123/246 (50.00%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 723
            +FL E  ++    H N++++ G   +   ++++ E+MEN +L   L    GE S L+L   +R     GIA G+ +L   +    VHRD+ A N+L++ +L  K+SDFGL+++  D+ E T+ ++     I + APE   +   T  +DV+SFG+V  E+++      Y           W    H    +M+ ++   RL +  +   A  + ++ + C     + RP  +++VS+L+     PD
Sbjct:  659 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEFMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-YGERPY-----------WELSNHE---VMKAINDGFRLPTPMDCPSA--IYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 879          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14
Identity = 47/156 (30.13%), Postives = 89/156 (57.05%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F+ E  +++ LQHPNLV+++G C +   + +V EYM++ SL + L   E + +  N  +   +C+ +++G+ +L    R   +HRD+ A N L+  +   K++DFGLA+   +++   S      I +  PE   +   + K+DV+++GV+  EI
Sbjct:  565 DFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIG-NMGLLLDMCIQVSKGMTYLE---RHNYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEI 716          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y9848_DICDI (Probable serine/threonine-protein kinase DDB_G0272092 OS=Dictyostelium discoideum GN=DDB_G0272092 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.733e-14
Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            EF  E  ++S L+ P +V  HG  ++ D+L +V EY    SL H L   ++   +  W     +       L  LH  +  +++HRD+K+ N+L+  +   KI DFGL++ D         ++ GT  Y+APE       T K+DVYS G++  E+
Sbjct:  641 EFKKEFQIVSALRAPGVVYFHGAGIK-DKLCIVMEYCSRGSLYHIL---KDDTTQFTWDNFFNLGTQAINSLDSLHNWTP-QVLHRDLKSLNLLVTENWTVKICDFGLSRFDTGSNLETLGKLRGTYAYVAPEVYFGKKYTTKSDVYSMGIILWEM 791          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: SVKA_DICDI (Serine/threonine-protein kinase svkA OS=Dictyostelium discoideum GN=svkA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.733e-14
Identity = 68/243 (27.98%), Postives = 116/243 (47.74%), Query Frame = 1
Query:   16 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV-----VSMLEGSSNIPDVI 729
            EI ++S  + P + K  G  ++G +L ++ EY+   S+   +  G   +  +   +R+     + +GL +LH E +   +HRDIKA NVLL    + K++DFG++    ++ T  +T V GT  +MAPE         KAD++S G+ ALE+  G+      P      P+   F + +         P L   F+K   E       LC N  P+ RPT  ++     +   + +S++ D+I
Sbjct:   58 EINVLSQCESPFVTKYFGSFLKGSKLWIIMEYLAGGSVLDLMKPGPFDEGYIAIILRE-----LLKGLEYLHSEGK---IHRDIKAANVLLSASGDVKLADFGVSGQLTDQMTKRNTFV-GTPFWMAPEVIKQTGYDSKADIWSMGITALEMAKGE------PPRADLHPMRALFLIPKD------PPPTLEGNFSKGFKE----FCALCLNKDPNQRPTAKDLLKHKFIKAAKKTSSLTDLI 275          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.733e-14
Identity = 71/242 (29.34%), Postives = 110/242 (45.45%), Query Frame = 1
Query:    7 FLNEIAMISCLQHPNLVKIHGCCVEGDQL--LLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD--FGL-AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 717
            +  +I  +S + H N V + G C E D    ++V+EY  N +L   L   E   L  +W  R +I +G A  L  +H  +   + H D  ++ + L  D   K+S+  F L A+L+   K H+S  +  T   + PE         +A+V+SFGV+ LEI+SGK + S            WA        L E++DP L   F + E E +  +   C       RP+M +V   L+   NI
Sbjct:  430 YRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHL--DWSARMRIIMGTAYCLQHMHGMNP-PMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNP--KKHVSGDLEQTSLLLPPEP--------EANVHSFGVLMLEIISGKLSFS----DEYGSIEQWASKYLEKDDLGEMIDPSL-KTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINI 653          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: EPHB4_MOUSE (Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.733e-14
Identity = 54/167 (32.34%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLN---WPVRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTH--ISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 477
            EFL+E +++   +HPN++++ G       ++++ E+MEN +L        +S L+LN   + V Q + +  GIA G+ +L E S    VHRD+ A N+L++ +L  K+SDFGL++  EE  +    ++ + G  +I + APE   +   T  +D +S+G+V  E++S
Sbjct:  660 EFLSEASIMGQFEHPNIIRLEGVVTNSVPVMILTEFMENGAL--------DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKISIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 815          
The following BLAST results are available for this feature:
BLAST of DY305085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NTRK2_RAT1.327e-1432.53BDNF/NT-3 growth factors receptor OS=Rattus norveg... [more]
NTRK2_MOUSE1.327e-1432.53BDNF/NT-3 growth factors receptor OS=Mus musculus ... [more]
NTRK2_HUMAN1.327e-1432.53BDNF/NT-3 growth factors receptor OS=Homo sapiens ... [more]
NTRK2_CHICK1.327e-1432.53BDNF/NT-3 growth factors receptor OS=Gallus gallus... [more]
EPHA2_MACFA1.327e-1427.24Ephrin type-A receptor 2 OS=Macaca fascicularis GN... [more]
BTKL_DROME1.327e-1430.13Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
Y9848_DICDI1.733e-1431.41Probable serine/threonine-protein kinase DDB_G0272... [more]
SVKA_DICDI1.733e-1427.98Serine/threonine-protein kinase svkA OS=Dictyostel... [more]
MRH1_ARATH1.733e-1429.34Probable LRR receptor-like serine/threonine-protei... [more]
EPHB4_MOUSE1.733e-1432.34Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305085 ID=DY305085; Name=DY305085; organism=Citrus clementina; type=EST; length=1225bp
GGTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAA
TCTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAG
TATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGC
GAAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCT
TGGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAA
TAGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTA
AACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAA
AACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAG
AGTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTC
GGAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGT
GCCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACC
GAAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTC
AACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAA
TGCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGG
AAGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGT
GAAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATAA
TTCGGGTTTGGAGGGAAATCTGTCTCATTATTCATCGTCAGCCAGCTTCT
TGCCTGGTTCTTCCTCTACCGATGATGTCCGTGAAATTTATGCAAAAGCA
AATTTGAAGTTTAAGGCCCTGAAAAACAGTCCTATTCATATGGAAAAGAC
AAAAATCGGTTGGCCAATTATCAACACCCATCCCCCCCAGGAACTGGTTC
CTTCAAAATCCGCCCATGAATCTTCCCAAAAACAATTTTGAAGTCCAGCC
GGATGTGCAAAAAATCCTTCCGCAAAGCCAATTTTTAAAATTTTTAAACA
TTTTAAATTTTTTTTTGTAAACCCTAACCTTCCTTTTTGGTTCCAAAACC
TTTTCCCCCCCCACCCCCCTTTTTTTTTTAATTCCAAAAAAATTTTTTTT
AACCCACAGATATTAACATAAATAC
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