DY305085

Overview
NameDY305085
Unique NameDY305085
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1225
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.965e-42
Identity = 97/264 (36.74%), Postives = 150/264 (56.82%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS----SNIPDVIPEAGGLSEDLRFKTLRD 780
            EF NE+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G    +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD  +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE +    +N  + +     L    R+  + D
Sbjct:  635 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMD 898          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.566e-42
Identity = 103/250 (41.20%), Postives = 151/250 (60.40%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM---SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEA 738
            EF  EI ++S + H N+VK+ G C +  + +LVYEY+ N SL   L G   + +KL+W  R KI LG  +GLA+LHE +   I+HRD+K+ N+LLD  L  K++DFGL+KL  + EK H++T+V GT+GY+ PEY +   LT K+DVY FGVV LE+++GK+ +   SYV        +D + +L+    L EL+D  +      ++  E+ + +AL C       RPTMSEVV  LE    +  + P A
Sbjct:  674 EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSG--KNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVV-KEVKKKMDKSRNLY---DLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPNA 917          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.566e-42
Identity = 94/241 (39.00%), Postives = 142/241 (58.92%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS---YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 717
            +F+ E+A++S + H NLV + G C E D+ +LVYEYM N SL   L G  + +  L+W  R +I    A+GL +LH      I+HRD+K++N+LLD ++  K+SDFGL++  EE+ TH+S+   GT+GY+ PEY     LT K+DVYSFGVV  E++SGK  +S   + P+ N    + WA  L R G +  ++DP + S        R+ ++A  C       RP M EV+  ++ +  I
Sbjct:  646 QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK-PLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNI---VHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRI 882          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.466e-42
Identity = 89/233 (38.20%), Postives = 132/233 (56.65%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 702
            EF  E+  +S  +H NLV + G C  G+  LL+Y +MEN SL + L    +  + L W VR KI  G ARGLA+LH+     ++HRD+K++N+LLD      ++DFGLA+L     TH++T + GT+GY+ PEY+     T + DVYSFGVV LE+V+G+  +      +C   +   F +       EL+D  +    N+     M++IA  C +  P  RP + EVV+ LE
Sbjct:  794 EFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.751e-42
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGEN-SQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 702
            EF  E+ M+S L+H +LV + G C E ++++LVYEYM + +L   LF  +  S   L+W  R +IC+G ARGL +LH  +++ I+HRDIK TN+LLD +   K+SDFGL+++      +TH+ST V GT GY+ PEY     LT K+DVYSFGVV LE++  +   M  VP       + W    +R GT+ +++D  L ++      E+  +IA+ C       RP M++VV  LE
Sbjct:  559 EFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADL-IRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALE 794          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.274e-41
Identity = 99/240 (41.25%), Postives = 145/240 (60.42%), Query Frame = 1
Query:    1 GEFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGT---LMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 702
            GEF  E+A +S ++H N+VK+       D  LLVYEYM N SL   L      Q ++ W VRQ + LG A+GL +LH      ++HRD+K++N+LLD +  P+I+DFGLAK+   D  ++   +  V GT+GY+APEYA    +  K+DVYSFGVV +E+V+GK  +      N    + W + + +      +M+L+D  +  E+ K +A +++ IALLCT+ SP  RP M  VVSMLE
Sbjct:  728 GEFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQ-EIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVM-WVWSVSKETNREMMMKLIDTSIEDEY-KEDALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 3.705e-41
Identity = 99/245 (40.41%), Postives = 143/245 (58.37%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP 732
            E+ +E+  +  L H NLVK+ G C E  +LLLVYE+M   SL   LF   +      W +R KI +G ARGLAFLH   R ++++RD KA+N+LLD + + K+SDFGLAKL   +EK+H++TR+ GT GY APEY   G+L  K+DV++FGVV LEI++G    +          +DW    L     + +++D  +  ++    A  M +I L C    P  RP M EVV +LE    + +V+P
Sbjct:  136 EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDP---FPWDLRIKIVIGAARGLAFLHSLQR-EVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGL-NVVP 375          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.320e-41
Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSED 756
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G + +       L+W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K+SDFGL+K    ++ H+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           ++A +LHR G L +++DP++    +K    + ++ A  C       RP M +V+  LE +  + +   +   LSED
Sbjct:  565 EFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASAQV-DLSED 818          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.078e-40
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 1
Query:    4 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-----GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 741
            EFL +++M+S L+H N V++ G CV+G+  +L YE+  N SL   L G     G      L+W  R KI +G ARGL +LHE++   I+HRDIK++NVLL  D   KI+DF L+    +    + STRV GT GY APEYA+ G L  K+DVYSFGVV LE+++G+  + +         + WA        + + VD RLG ++      ++  +A LC       RP MS VV  L+   N   V P  G
Sbjct:  112 EFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGEG 363          
BLAST of DY305085 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.078e-40
Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 1
Query:    7 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKI---ALLCTNASPSLRPTMSEVVSMLE 702
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL   L     S L  +W +R +I LG A+GLA+LH +    IVHRDIKA N+L+  D  P I+DFGLAKL DE +    S  VAG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   VP+      +DW   + ++   +E++D  L S   + EA+ M+++   ALLC N+SP  RPTM +V +ML+
Sbjct:  836 FSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEG--IHLVDW---VRQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
The following BLAST results are available for this feature:
BLAST of DY305085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NORK_PEA1.965e-4236.74Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5977_ARATH2.566e-4241.20Probable leucine-rich repeat receptor-like protein... [more]
Y1677_ARATH2.566e-4239.00Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH7.466e-4238.20Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y5900_ARATH9.751e-4240.51Putative receptor-like protein kinase At5g39000 OS... [more]
IKU2_ARATH1.274e-4141.25Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CX32_ARATH3.705e-4140.41Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5613_ARATH6.320e-4137.65Probable receptor-like protein kinase At5g61350 OS... [more]
Y2706_ARATH1.078e-4039.29Probable receptor-like protein kinase At2g47060 OS... [more]
RCH2_ARATH1.078e-4042.19Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305085 ID=DY305085; Name=DY305085; organism=Citrus clementina; type=EST; length=1225bp
GGTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAA
TCTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAG
TATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGC
GAAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCT
TGGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAA
TAGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTA
AACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAA
AACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAG
AGTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTC
GGAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGT
GCCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACC
GAAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTC
AACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAA
TGCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGG
AAGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGT
GAAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATAA
TTCGGGTTTGGAGGGAAATCTGTCTCATTATTCATCGTCAGCCAGCTTCT
TGCCTGGTTCTTCCTCTACCGATGATGTCCGTGAAATTTATGCAAAAGCA
AATTTGAAGTTTAAGGCCCTGAAAAACAGTCCTATTCATATGGAAAAGAC
AAAAATCGGTTGGCCAATTATCAACACCCATCCCCCCCAGGAACTGGTTC
CTTCAAAATCCGCCCATGAATCTTCCCAAAAACAATTTTGAAGTCCAGCC
GGATGTGCAAAAAATCCTTCCGCAAAGCCAATTTTTAAAATTTTTAAACA
TTTTAAATTTTTTTTTGTAAACCCTAACCTTCCTTTTTGGTTCCAAAACC
TTTTCCCCCCCCACCCCCCTTTTTTTTTTAATTCCAAAAAAATTTTTTTT
AACCCACAGATATTAACATAAATAC
back to top