DY305130
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NDHK_PROM4 (NAD(P)H-quinone oxidoreductase subunit K OS=Prochlorococcus marinus (strain MIT 9211) GN=ndhK PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.243e-33 Identity = 62/140 (44.29%), Postives = 98/140 (70.00%), Query Frame = 3
Query: 321 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 737
+++ LDD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++VAGT+T KMAPAL ++Y+QMPDP++VI+MG+C D+++PVD+Y+PGCPP EA+ +++L+KK+
Sbjct: 48 ILTSLDDLHNWARLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLLIVAGTVTMKMAPALVRLYEQMPDPKYVIAMGACTITGGMFSADSTTAVRGVDKLIPVDLYLPGCPPRPEAIFDAVIKLRKKV 187
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSYWF (NADH-quinone oxidoreductase subunit B OS=Psychrobacter sp. (strain PRwf-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.929e-33 Identity = 71/147 (48.30%), Postives = 99/147 (67.35%), Query Frame = 3
Query: 324 ISKLDDVV----NYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+D+V N+ R+ S+WP +FG +CC VE T A +DL RFG + R SPRQ+DVM+VAGT KMAP ++++Y+QM +P+WVISMGSCAN D+I+PVD+YVPGCPP EAL+ G++ LQ+ + + R
Sbjct: 37 MGKLEDMVHASANWGRKNSLWPFNFGTSCCYVEYATTLTAVHDLSRFGAEVIRASPRQADVMIVAGTCFVKMAPVIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKIIPVDVYVPGCPPRPEALIQGLMLLQESITKER 182
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_KLEP7 (NADH-quinone oxidoreductase subunit B OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nuoB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.997e-33 Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 333 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
L D+VN+ R+ SIWP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D+MVVAGT KMAP ++++YDQM +P+WVISMG+CAN D+ +PVD+Y+PGCPP EA + ++ LQ+ + + R
Sbjct: 46 LHDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_KLEP3 (NADH-quinone oxidoreductase subunit B OS=Klebsiella pneumoniae (strain 342) GN=nuoB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.997e-33 Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 333 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
L D+VN+ R+ SIWP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D+MVVAGT KMAP ++++YDQM +P+WVISMG+CAN D+ +PVD+Y+PGCPP EA + ++ LQ+ + + R
Sbjct: 46 LHDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_CITK8 (NADH-quinone oxidoreductase subunit B OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nuoB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.997e-33 Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 333 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
L D+VN+ R+ SIWP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D+MVVAGT KMAP ++++YDQM +P+WVISMG+CAN D+ +PVD+Y+PGCPP EA + ++ LQ+ + + R
Sbjct: 46 LHDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NDHK_PROM3 (NAD(P)H-quinone oxidoreductase subunit K OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhK PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.997e-33 Identity = 65/153 (42.48%), Postives = 103/153 (67.32%), Query Frame = 3
Query: 294 GGISKTAEF----VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 737
G S T+E +++ LDD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++VAGT+T KMAPAL ++Y+QMP+P++VI+MG+C D+++PVD+Y+PGCPP EA+ +++L+KK+
Sbjct: 22 GAPSVTSELSENIILTSLDDLHNWARLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLLIVAGTVTMKMAPALVRLYEQMPEPKYVIAMGACTITGGMFSADSTTAVRGVDKLIPVDLYLPGCPPRPEAIFDAVIKLRKKV 174
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NDHK_CYAP7 (NAD(P)H-quinone oxidoreductase subunit K OS=Cyanothece sp. (strain PCC 7424) GN=ndhK PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.997e-33 Identity = 61/140 (43.57%), Postives = 97/140 (69.29%), Query Frame = 3
Query: 321 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 737
+++ +DD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL ++Y+QMPDP++VI+MG+C D+++PVD+Y+PGCPP EA+ I++L+KK+
Sbjct: 38 ILTTVDDLYNWARLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLIITAGTITMKMAPALVRLYEQMPDPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYIPGCPPRPEAIFDAIVKLRKKV 177
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_CAMFF (NADH-quinone oxidoreductase subunit B OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=nuoB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.526e-33 Identity = 64/143 (44.76%), Postives = 100/143 (69.93%), Query Frame = 3
Query: 315 EFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMN 740
+ V+++LD + N+ R+ S+WPM FG ACCA+E M ++++DL RFG + R SPRQ+D+M++AGT++ K AP L+++YDQM +P+WV+SMG+CA D+I+PVD+Y+ GCPP EA++ IL +Q K++
Sbjct: 10 DVVLTRLDALFNWGRKNSLWPMIFGTACCAIEFMSAVSSKHDLSRFGAEVMRFSPRQADLMIIAGTISFKQAPILKEIYDQMCEPKWVVSMGACA-CSGGFYDNYTTLQGIDQIIPVDVYISGCPPRPEAIIDAILAIQDKIS 151
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB1_NITMU (NADH-quinone oxidoreductase subunit B 1 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.526e-33 Identity = 67/144 (46.53%), Postives = 99/144 (68.75%), Query Frame = 3
Query: 321 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
++++L D+V + R+ S+WP +FGL+CC VEM + ++YDL RFG + R SPRQ+D++V++GT+ KMAP L+++YDQM +PRWVISMGSCAN DR +PVD+YVPGCPP +A + G+ LQ + + +
Sbjct: 37 LLTRLQDLVAWGRKNSVWPYNFGLSCCYVEMATSFTSKYDLARFGSEVIRASPRQADLIVISGTVFIKMAPVLQRLYDQMLEPRWVISMGSCAN-SGGMYDIYSVVQGVDRFLPVDVYVPGCPPRPDAFMQGLNLLQDAIGKEK 179
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NDHK_SYNSC (NAD(P)H-quinone oxidoreductase subunit K OS=Synechococcus sp. (strain CC9605) GN=ndhK PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.526e-33 Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 3
Query: 321 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 737
+++ LDD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++VAGT+T KMAPAL ++Y+QMP+P++VI+MG+C D+++PVD+Y+PGCPP EA+ +++L+KK+
Sbjct: 37 ILTSLDDLHNWARLSSLWPLLYGTACCFIEFAALLGSRFDFDRFGLVPRSSPRQADLLIVAGTVTMKMAPALVRLYEQMPEPKYVIAMGACTITGGMFSADSTTAVRGVDKLIPVDLYLPGCPPRPEAIFDAVIKLRKKV 176 The following BLAST results are available for this feature:
BLAST of DY305130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305130 ID=DY305130; Name=DY305130; organism=Citrus clementina; type=EST; length=1261bpback to top |