DY305130
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_SERP5 (NADH-quinone oxidoreductase subunit B OS=Serratia proteamaculans (strain 568) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 333 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
L D+VN+ R+ SIWP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D+MVVAGT KMAP ++++Y+QM +P+WVISMG+CAN D+ +PVD+Y+PGCPP EA + ++ LQ+ + + R
Sbjct: 46 LHDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYEQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYMQALMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSYCK (NADH-quinone oxidoreductase subunit B OS=Psychrobacter cryohalolentis (strain K5) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 3
Query: 324 ISKLDDVV----NYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ +L+D+V N+ R+ S+WP +FG +CC VE T A +DL RFG + R SPRQ+DVM+VAGT KMAP ++++Y+QM +P+WVISMG+CAN D+I+PVD+YVPGCPP EAL+ G++ LQ+ + + R
Sbjct: 37 MGRLEDLVHSTANWGRKHSLWPFNFGTSCCYVEYATTLTAVHDLSRFGAEVIRASPRQADVMIVAGTCFVKMAPVIQRLYEQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKIIPVDVYVPGCPPRPEALIQGLMLLQESITKER 182
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSYA2 (NADH-quinone oxidoreductase subunit B OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 3
Query: 324 ISKLDDVV----NYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ +L+D+V N+ R+ S+WP +FG +CC VE T A +DL RFG + R SPRQ+DVM+VAGT KMAP ++++Y+QM +P+WVISMG+CAN D+I+PVD+YVPGCPP EAL+ G++ LQ+ + + R
Sbjct: 37 MGRLEDLVHSTANWGRKHSLWPFNFGTSCCYVEYATTLTAVHDLSRFGAEVIRASPRQADVMIVAGTCFVKMAPVIQRLYEQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKIIPVDVYVPGCPPRPEALIQGLMLLQESITKER 182
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSEU2 (NADH-quinone oxidoreductase subunit B OS=Pseudomonas syringae pv. syringae (strain B728a) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 3
Query: 324 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R
Sbjct: 39 MGKLEDVLSGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSESM (NADH-quinone oxidoreductase subunit B OS=Pseudomonas syringae pv. tomato GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 3
Query: 324 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R
Sbjct: 39 MGKLEDVLNGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSEFS (NADH-quinone oxidoreductase subunit B OS=Pseudomonas fluorescens (strain SBW25) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 3
Query: 324 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R
Sbjct: 39 MGKLEDVLSGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSE14 (NADH-quinone oxidoreductase subunit B OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 3
Query: 324 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R
Sbjct: 39 MGKLEDVLNGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_BUCBP (NADH-quinone oxidoreductase subunit B OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nuoB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 65/140 (46.43%), Postives = 97/140 (69.29%), Query Frame = 3
Query: 333 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
L ++VN+ R+ S+WP +FGL+CC VEM+ + + +D+ RFG + R SPRQ+D MV+AGT KM P ++++YDQM +P+WVISMGSCAN D+ +PVD+Y+PGCPP EA ++G++ LQK +++ R
Sbjct: 46 LHNLVNWGRKNSLWPYNFGLSCCYVEMVTSFTSVHDISRFGSEVLRASPRQADFMVIAGTPFIKMVPIIQRLYDQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYIHGLMLLQKSISKER 184
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB1_SYMTH (NADH-quinone oxidoreductase subunit B 1 OS=Symbiobacterium thermophilum GN=nuoB1 PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 2.480e-32 Identity = 63/144 (43.75%), Postives = 100/144 (69.44%), Query Frame = 3
Query: 318 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAA-RYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 743
FV + +D + + + SIWP++FGLACCA+EMM+ + RYD+ RFG FR SPRQ+D++ ++G ++NKMAP +++VY QM +P+WV++ G+CA+ D ++PVDIYVPGCPPT EA++Y + +L+ ++ +
Sbjct: 13 FVTTTVDSFLRWAQSNSIWPLTFGLACCAIEMMNLASGPRYDIARFGSEAFRASPRQADLIFISGRVSNKMAPVIKRVYSQMLEPKWVVAFGACAS-SGGIFDNYAIMQGVDNLLPVDIYVPGCPPTPEAVIYAVQKLRDRIRK 155
BLAST of DY305130 vs. ExPASy Swiss-Prot
Match: NUOB_PSEPW (NADH-quinone oxidoreductase subunit B OS=Pseudomonas putida (strain W619) GN=nuoB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.239e-32 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 3
Query: 324 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRR 749
+ KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R
Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQER 185 The following BLAST results are available for this feature:
BLAST of DY305130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305130 ID=DY305130; Name=DY305130; organism=Citrus clementina; type=EST; length=1261bpback to top |