DY305133

Overview
NameDY305133
Unique NameDY305133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1109
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.402e-28
Identity = 76/186 (40.86%), Postives = 103/186 (55.38%), Query Frame = 2
Query:  359 RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLREQWTH 907
            RNL + S    + +  F    L+ AT+ FS + ++G+GG   V+ G L NG+ VA+KRL   T D +  +F +E+ +++ + H N  KLLG  IEG   + V E  PN SL   L+   +   L W  R  I LG AEGL YLH G   RIIHRDIK +N+LL +   P+I DFGL        TH
Sbjct:  287 RNLGLVSRKFNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWV-EEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTH 471          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.402e-28
Identity = 68/165 (41.21%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  407 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLR 892
            + L  +++AT  FS  N++G+GG+ EV+KG L++G  +A+KRL++ +A  +  +F +E  ++A + H N   +LG+ +EG   I V E  PN SL   L+   +K  L W  RYKI +G A G+LYLH     +IIHRD+KA+NILL  + EP++ DFG+    R
Sbjct:  309 YDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGV-QEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFR 472          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.138e-28
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  407 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH--IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLREQWTHHT 913
            F+L +L+ ATN F+  N++G+GGY  VY+G+L NG  VA+K+L    G A++   +F  E+  + HV H N  +LLGY IEG +H  +V E   +G+L   L+G   +   L W  R KI  G A+ L YLHE  + +++HRDIKA+NIL+ ++F  ++ DFGL + L    +H T
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEK---EFRVEVEAIGHVRHKNLVRLLGYCIEG-VHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHIT 342          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.138e-28
Identity = 68/166 (40.96%), Postives = 102/166 (61.45%), Query Frame = 2
Query:  407 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSEL-GIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWL 889
            +++ +LQ ATN+FS +NL+G+G +  VY+ +  +G+++A+K++         AD  +E+   +AH+DH N  KL GY  E G H+V+ E   NGSL   L+  +E+ K   W  R KIALG A  L YLHE C   I+H++IK+ANILL  +  P + D GL  +L
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFL 572          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.138e-28
Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 2
Query:  407 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLREQWTHHTIFKI 925
            F    +++AT NF   N +G GG+ EVYKG   NG  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY ++G   I V E  PN SL   L+    K +L W  RY I  G+  G++YLH+  +  IIHRD+KA NILL  D  P+I DFG+    R   T  T  ++
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSK-TSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARV 474          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.138e-28
Identity = 69/155 (44.52%), Postives = 101/155 (65.16%), Query Frame = 2
Query:  422 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGL 877
            +Q+AT++F   N IG+GG+ EVYKG L +G  VA+KRL++ +    + +F +E+ ++A + H N  +LLG+ ++G   + V E  PN SL   L+    K +L W  RYKI  GVA G+LYLH+  +  IIHRD+KA+NILL  D  P+I DFG+
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEV-EFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGM 483          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.098e-28
Identity = 66/168 (39.29%), Postives = 103/168 (61.31%), Query Frame = 2
Query:  401 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADE-IIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWL 889
            +++S+ +LQ AT +FS +NL+G+G +  VY+    +G+++A+K++        +  DF+  +  +A++DHPN  KL+GY  E G H+V+ E   NGSL   L+  +E+ K   W  R KIALG A  L YLHE C   I+ ++IK+ANILL  +  P + D GL  +L
Sbjct:  402 RLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFL 569          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.352e-28
Identity = 78/231 (33.77%), Postives = 130/231 (56.28%), Query Frame = 2
Query:  248 LFYDLFRNKSKKSLVTLYPLKLSIRRSS-SMREGIDMPRNLFVNSYDSQSPQ-KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLREQWTHHTIFKI 925
            + + L++ K K++  +   +  + R  +  M E +   +  F   Y  +  +  +  +  +  AT NFS  N +G+GG+  VYKGRL +G+ +A+KRL++ T+ +   +F++E+ ++A + H N  ++LG  IEG   +++ E   N SL S L+G   + KL W  R+ I  GVA GLLYLH+  + RIIHRD+K +NILL ++  P+I DFG+        T     K+
Sbjct:  461 IMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSK-TSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKV 690          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 5.352e-28
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 2
Query:  287 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGL 877
            LV L   +L  RR  S +E ID+ ++     +  Q   K      ++ AT NF+  N +G+GG+ EVYKG L NG  VA+KRL++ T+++   +F +E+ ++A + H N  KLLGY +E    I V E  PN SL   L+   ++  L W  RY I  G+  G+LYLH+  +  IIHRD+KA+NILL  D  P+I DFG+
Sbjct:  321 LVLLVLSRLFARRRKSYQE-IDLDQSGITTLHFQQLDFKT-----IEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSK-TSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGM 513          
BLAST of DY305133 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 6.990e-28
Identity = 81/216 (37.50%), Postives = 122/216 (56.48%), Query Frame = 2
Query:  290 VTLYPLKLSIRRSSSMR-EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLTEWLREQWTHHTIF 919
            V LY      RR++  R EG D+   +     D+Q  Q  F    L  ATN+FS +N +G+GG+  VYKG L  G+ +A+KRL+   G  D    +F++E+ ++A + H N  +LLG+ ++G   I++ E   N SL   ++    +  L W  RY+I  GVA GLLYLHE  + +I+HRD+KA+N+LL +   P+I DFG+ +      T  T F
Sbjct:  297 VFLYFFMTRNRRTAKQRHEGKDLEELMIK---DAQLLQLDFDTIRL--ATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDN---EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRF 504          
The following BLAST results are available for this feature:
BLAST of DY305133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK42_ARATH2.402e-2840.86Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK33_ARATH2.402e-2841.21Putative cysteine-rich receptor-like protein kinas... [more]
Y2296_ARATH3.138e-2841.48Probable receptor-like protein kinase At2g42960 OS... [more]
SRF7_ARATH3.138e-2840.96Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
CRK24_ARATH3.138e-2840.91Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK10_ARATH3.138e-2844.52Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
SRF6_ARATH4.098e-2839.29Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
SRK6_BRAOE5.352e-2833.77Putative serine/threonine-protein kinase receptor ... [more]
CRK12_ARATH5.352e-2840.50Putative cysteine-rich receptor-like protein kinas... [more]
CRK41_ARATH6.990e-2837.50Cysteine-rich receptor-like protein kinase 41 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CC11RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305133 ID=DY305133; Name=DY305133; organism=Citrus clementina; type=EST; length=1109bp
GATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAG
AATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAA
TATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCT
TGAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAAC
CATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTA
TTCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTA
TCCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTG
ATATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAG
AAGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTT
CGAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTT
TGAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCA
GATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGT
CGATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCA
TGCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTT
TATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTT
AGGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAA
TCATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTC
GAGCCTCAGATTTGTGATTTTGGACTAACGGAATGGCTACGGGAGCAATG
GACTCATCACACAATATTCAAAATTGAAAGGCACATTTGGGCTATCTTGC
TTCTGAAGTTCTTATGGCATGGGGATTAGTAGAATAAAAAAAACGACTTC
TTTGGCCTTCCGGGTATTACCTACTGGGAATTGGGCCCCCGGGAACCCCA
AACCCCCTTGATTACTTCTCCCCCAAAAACCTTTGGTTTTAATGGGGCAA
AGGCCCATA
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