DY305175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305175 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.112e-17 Identity = 56/208 (26.92%), Postives = 100/208 (48.08%), Query Frame = -3 Query: 179 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 802 G+ SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + I F+YI+ TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 90 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 297
BLAST of DY305175 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.185e-14 Identity = 65/241 (26.97%), Postives = 112/241 (46.47%), Query Frame = -3 Query: 182 VFAYGLMVRKYIRTRTQGTLIFL*LKFFC*QLGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 898 VF G + ++Y+ + T+ F Q G+ S+++TL QA+GANK + IYLQR ++L + I + ++++ ILIFL + P +A ++ I YA+ ++++LQAQ I P Y+ +++LL+++ V+ ++W I +YI S W GF+ QA L S +M+ E +++ L AG L LA S+ Sbjct: 116 VFTLGHLGKEYLAASSLSTMTAAISAFSIFQ-GVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSS-TPIPWPGFSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSLGAGYLGTAPLASQSI 354
BLAST of DY305175 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.085e-13 Identity = 56/212 (26.42%), Postives = 100/212 (47.17%), Query Frame = -3 Query: 182 LGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 805 +G+ SA +TL Q++G+ + +G+ LQR A++L L + L++ ++ IL+ + P+++ +F+ GL P IF Y L + K+LQ Q I P V+ + ++ V S + + +YIV TW G++ Q FF L+ S +M+C+E W ++I L GLL +L+ ++ Sbjct: 86 VGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGL-PVIFLYNL---LAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAV 293
BLAST of DY305175 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.416e-13 Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = -3 Query: 212 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLL 802 G+ SA +TL Q++G+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ A +F+ GL P IF Y+L + K+LQ Q IV P V+ + ++ V S ++ F++IV TW G++ Q F L+ S +M+C+E W ++I L GLL Sbjct: 116 GLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGL-PAIFLYSL---LAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLL 312
BLAST of DY305175 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae GN=YDR338C PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.557e-12 Identity = 51/208 (24.52%), Postives = 99/208 (47.60%), Query Frame = -3 Query: 185 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDS 802 G+ ++++TLC QAYG+ ++ +G++LQR + I V++ +S P+L ++ ++ + + F+ LI AY +++FLQAQ I Y+ T +++L+S+ V+ ++W++ Y + D K W GF+ +AF+ L+ + +ML E +++L L + LA S Sbjct: 284 GIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYIGVGFIGAAIAVVLNFWLMFFLLLFYALYIDGRK-CWGGFSRKAFTHWNDLGHLAFSGIIMLEAEELSYELLTLFSAYYGVSYLAAQS 490 The following BLAST results are available for this feature:
BLAST of DY305175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305175 ID=DY305175; Name=DY305175; organism=Citrus clementina; type=EST; length=1197bpback to top |