DY305242

Overview
NameDY305242
Unique NameDY305242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1254
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305242 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.974e-11
Identity = 27/52 (51.92%), Postives = 41/52 (78.85%), Query Frame = 2 
Query:   35 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAK 190
            +VYDVTD++SF +++ W+  I+++ASD+VNK+L+GNKCD+T  KVV     K
Sbjct:   93 LVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGK 144
The following BLAST results are available for this feature:
BLAST of DY305242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RAB8B_DICDI6.974e-1151.92Ras-related protein Rab-8B OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AC08RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305242 ID=DY305242; Name=DY305242; organism=Citrus clementina; type=EST; length=1254bp
TGCCGAATTCGGCACGAGGTGTCTCCTCTGGTAGATTGTTTATGATGTGA
CAGACCAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGAC
CGTTATGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGA
TCTCACTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGTATATCTAC
TTCTCTACACTGGCATTTTCTTTTTTTACCCCTCCCCTTAACAAGGTTCA
AGCCACTTCCTCCCCCCTCCAAATTATGTGTCAAAGTAAATTTTGTATAA
TGATCCGAAATTGCTATTTCCACCATTCTTAATGGTGAACCTTTATGTCG
ATTCGTATTGCATTCATCAAGATAGTCTTTAGTTGCTGGCCAGTAAAGGC
ACTAGAGTTTGAGTTGGATAAAAAGCCTTCCTTCAAAGATTATAACTCGA
AGACTCCTTACCTTAGGAGCTGGATAAGTGATACATCTGGCGAGCATTCT
GTTGACCCCTTGTACTCTTCTTCTTTATTAGGCATTTGCAGATGAAATTG
GAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAG
GCATTCATGGCCATGGCTGCTTCAATCAAGGATAGGTATTGATGCATATT
TGCTTTCTATATTAAACGCGAAATAGATTGATAGGAGTATTGTGTTTTGC
CTTCTTTTTGAAGAAGTCTTCAGATTACGTAACGCCATAACTTCATACAG
TTACTTATATTACCTGCTATATTTGTTTTCTATATTAAACGCGAAATAGA
TTGATAGGAGTATCGTATTTTGCCTTTCTTTTTGAGAAATCTTCAGATTA
CATAACGGCATAACTTCATACAGTTACTTATATTACCTGCTTCCACTTGA
AAGGCCTTTAAATAACTACTATTGGCTAATTTGTGCAGGTTTAGTGTTTA
ATAATGGCTTAAATTTTATAAATTGGAGGGCAAAAGGGAAATTTCACCTT
TCCTTGAAAAATGGCAAGGGCCCCCCACTTGGAAACAATTTAAGGGGGAA
GCCTGTTTGCCCAAAAAAAAAGGGCGGCGGGCCCCTACTTAAATTAACAA
TTTGGAAAAATAACCCTGTTCCCGGGGGTCTCTGCCGGGGAAACCTAAGA
GGGGGGGGGGGAATAAGGTCTTTTTTCCTTCTTTTTTTTTCTATTTTATA
AAAAAACCTTTATTTTCTTTTCCTTGGGGGACAAACACACAAACCCCCTT
CCCT
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