DY305302

Overview
NameDY305302
Unique NameDY305302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1221
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305302 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.172e-17
Identity = 56/208 (26.92%), Postives = 100/208 (48.08%), Query Frame = -3
Query:  179 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 802
            G+ SA +TL  Q YG+   + +G+ LQR  ++L L       L++ +  IL+   + PD++     +V   IP + A  L     K+L  Q IV P      A  +V+ L +++ +++              S + + I  F+YI+       TW G++ +      SF +L+  S +MLC+E W +++   L+G+L   EL   S++
Sbjct:   90 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 297          
BLAST of DY305302 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.116e-13
Identity = 56/212 (26.42%), Postives = 100/212 (47.17%), Query Frame = -3
Query:  182 LGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 805
            +G+ SA +TL  Q++G+   + +G+ LQR A++L L  +    L++ ++ IL+   + P+++        +F+ GL P IF Y L   + K+LQ Q I  P          V+ + ++  V                S +   +   +YIV       TW G++ Q       FF L+  S +M+C+E W ++I   L GLL   +L+  ++
Sbjct:   86 VGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGL-PVIFLYNL---LAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAV 293          
BLAST of DY305302 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.457e-13
Identity = 60/217 (27.65%), Postives = 102/217 (47.00%), Query Frame = -3
Query:  182 IKSFC*QLGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 826
            I +F    G+ S+++TL  QA+GANK   + IYLQR  ++L +  I + ++++    ILIFL + P +A     ++   I     YA+   ++++LQAQ I  P  Y+      +++LL+++ V+                 ++W   I   +YI  S      W GF+ QA   L      S    +M+  E   +++  L AG L    LA  S+
Sbjct:  139 ISAFSIFQGVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSS-TPIPWPGFSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSLGAGYLGTAPLASQSI 354          
BLAST of DY305302 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.485e-13
Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = -3
Query:  212 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLL 802
            G+ SA +TL  Q++G+   + +G+ LQR +++L L  +    L++ ++ IL+   + P ++      A +F+ GL P IF Y+L   + K+LQ Q IV P          V+ + ++  V                S ++     F++IV       TW G++ Q       F  L+  S +M+C+E W ++I   L GLL
Sbjct:  116 GLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGL-PAIFLYSL---LAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLL 312          
BLAST of DY305302 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae GN=YDR338C PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.687e-12
Identity = 51/208 (24.52%), Postives = 99/208 (47.60%), Query Frame = -3
Query:  185 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDS 802
            G+ ++++TLC QAYG+ ++  +G++LQR      +  I   V++ +S P+L ++    ++ +  + F+  LI    AY     +++FLQAQ I     Y+ T    +++L+S+  V+                 ++W++      Y +  D  K  W GF+ +AF+       L+ +  +ML  E   +++L L +       LA  S
Sbjct:  284 GIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYIGVGFIGAAIAVVLNFWLMFFLLLFYALYIDGRK-CWGGFSRKAFTHWNDLGHLAFSGIIMLEAEELSYELLTLFSAYYGVSYLAAQS 490          
The following BLAST results are available for this feature:
BLAST of DY305302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
S47A1_RAT2.172e-1726.92Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A2_PONAB1.116e-1326.42Multidrug and toxin extrusion protein 2 OS=Pongo a... [more]
YL47_SCHPO1.457e-1327.65Uncharacterized transporter C323.07c OS=Schizosacc... [more]
S47A2_RABIT2.485e-1327.36Multidrug and toxin extrusion protein 2 OS=Oryctol... [more]
YD338_YEAST4.687e-1224.52Uncharacterized transporter YDR338C OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BB11RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305302 ID=DY305302; Name=DY305302; organism=Citrus clementina; type=EST; length=1221bp
GGGAAAATTACCCATTTGAACAATCAAATGTAGCAAATGATGGCTTTGGC
AACCAAATGAAATCATGAGTGATTTGTGAAACTAATTTACTGAAAGTTAA
GGGGGGAGAGCTTAGATGCAATTATCAGAAAAGGGCGTGACCAAAAAGGG
AAGGAAAATAGTTTTCTGCTTACCAAATGGAAAGAGAGTCCAAAGCCAAC
TCCGGATTTGGTAACAAACCAGCCAATAGAACAAGAATCTGAAAGTACCA
CGTCTCCAAGCACAGCATCACAGCGGAGGCAGCCGATAGTTTGAAGAAGG
AAGGGAGACCAGAGAAGGCCTGAACAGTAAACCCACGCCACGTGTGCTTA
CACCTATCACTTTTAACAATATAAACAAACTGAGCAATCACAACAATCCA
CCAGGATAAGCTCAAGATCAGTGAGGCGCCAATCAAGCCAAGCCCGATTT
CGTAGACTGCAACCCAACTTAGCAGCAGATGCACCACTAACGTGGCCGTT
GAAATGTATGCACTTGGAGCCACTATGCTTTGTGCTTGCAAAAATTTTTG
GATTGGGAAGTTCAAGGCGTATGCAAAGATTTGGGGTATCAGGCCGTAGA
CAAAAACTGCCGCTGATGAGGCAATATCTGGCGACTCCCCTAGAAAAATC
AAAATTGGTCTCGAAAAGACGTATAGAACTGTCATTAAAATCCCCGTGAG
CGTCAGCAGAACCGCTGATCTTTGCAAATATATCCCTAGCATTTCATATT
TGTTTGCACCGTATGCTTGCCCACATAATGTCTCCACGGCACTTCCCATT
CCCAACTGTTAACAAAAAGATTTTATTATAAGAATATTAAAGTACCCTGT
GTGCGTGTGCGTATGTACTTACGTAACATGAAGCCGTAGGGCAAAAACTT
GAATGCCGGTGTTGCCAAGGGAAGCGGCCGGCCACCTCAAGGTTGCCAAA
GTGGGCCGGAAAAAAATTGGGGTGGACAATAAACATGAGGGAATTAATTC
CGGGAAAACAAAAAACGGCCGGAGCCGGCCAAGGTGAAAAAAAAAAACTT
TTAATTTCAATTCCAAATTAACCCCGCCCCGGAAAAACTTTTGCCCCAAA
ATGGAAAAACCCTCATGGGTCTGGAAAAAAAAAAGGGCCTTTTCAAACCT
TCCTCCCCTTTTTTGGATTTTCCTTTGTTTTTTGTTTGGTCCTCCCCCAA
CAGGGCCCCCGGGGGGGGGGG
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