DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y1291_STAA3 (Uncharacterized hydrolase SAUSA300_1291 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1291 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 40/151 (26.49%), Postives = 72/151 (47.68%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +   + G A N +P +  + GT      +  T +K ++
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQM 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y1286_STAAW (Uncharacterized hydrolase MW1286 OS=Staphylococcus aureus (strain MW2) GN=MW1286 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 40/151 (26.49%), Postives = 72/151 (47.68%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +   + G A N +P +  + GT      +  T +K ++
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQM 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ABGA_ECOLI (Aminobenzoyl-glutamate utilization protein A OS=Escherichia coli (strain K12) GN=abgA PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHA-AIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLI----GGTFPALSKESFTPLKQRIEG 501
            LG A  L++    L G + L+FQPAEEG  GA  +++AGV++ V+    +H+   +P G V       +A +  F+A   G   HA A P+   + +LAA+   ++L H ++  ++   +  V V  +Q G   N +P S L+     G    +++  F   +Q I+G
Sbjct:  158 LGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTK-FDAHFTGTAAHAGAKPEDGHNALLAAAQATLAL-HAIAPHSE--GASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQG 321          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y968_STAEQ (Uncharacterized hydrolase SERP0968 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0968 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 39/153 (25.49%), Postives = 71/153 (46.41%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            + EL   VV +FQPAEE GGGA+++++AG  +K  + A+FG HV+P    G++  R   + A +  +   + G   H A  +          +V+  +  +     + L   ++ +   + G A N +P    + GT      E    +K ++
Sbjct:  114 KSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEGLQHVLSQIGQIQQFHLNGLKRNIIHMGHFEAGEAINTVPSHGYLEGTIRTYDTEDLAIVKHQM 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y1078_STAES (Uncharacterized hydrolase SE_1078 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1078 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 39/153 (25.49%), Postives = 71/153 (46.41%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            + EL   VV +FQPAEE GGGA+++++AG  +K  + A+FG HV+P    G++  R   + A +  +   + G   H A  +          +V+  +  +     + L   ++ +   + G A N +P    + GT      E    +K ++
Sbjct:  114 KSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEGLQHVLSQIGQIQQFHLNGLKRNIIHMGHFEAGEAINTVPSHGYLEGTIRTYDTEDLAIVKHQM 266          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
Y1291_STAA31.529e-1126.49Uncharacterized hydrolase SAUSA300_1291 OS=Staphyl... [more]
Y1286_STAAW1.529e-1126.49Uncharacterized hydrolase MW1286 OS=Staphylococcus... [more]
ABGA_ECOLI1.529e-1129.76Aminobenzoyl-glutamate utilization protein A OS=Es... [more]
Y968_STAEQ4.449e-1125.49Uncharacterized hydrolase SERP0968 OS=Staphylococc... [more]
Y1078_STAES4.449e-1125.49Uncharacterized hydrolase SE_1078 OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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