DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACAA (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain A0248) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.596e-27
Identity = 67/153 (43.79%), Postives = 94/153 (61.44%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES + +K RIE
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMSRVKSRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.391e-27
Identity = 70/168 (41.67%), Postives = 101/168 (60.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG       H   +K  ++ +FQPAEEG GGA  +LE+ VL+K   + I  LH+ P LP+G ++++ G L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+TV  I GG A N I +   + GT   LS+ES   +K+RIE
Sbjct:  100 MTIALGIIDHFVHH--PVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQLQTVISRNTDPLDSAVITVGTITGGTAQNIIAEHAHLEGTIRTLSEESMRMVKKRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +G   +     + +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES   +K RIE
Sbjct:  102 IGLGLLTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKDRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26
Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG       H  E    ++ +FQPAEEG GGA  ++EA VL   + + I+ LH+DPNLP+G +A++PG L A +        GKGGHAA P  + D ++A ++ +  +Q +V+R  DPLDS VVT+  I GG   N I  +  + GT   LS  S   +K R+E
Sbjct:   99 MTIALGLLDHFASHEPECH--LLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDPLDSAVVTLGVIAGGTKQNVIAATARLEGTIRTLSMASMEVVKSRLE 264          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES   +K RIE
Sbjct:  113 ERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26
Identity = 65/153 (42.48%), Postives = 93/153 (60.78%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIF--GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            E +K  ++ +FQPAEEG GGA  +L + VL+K    F   LH+ P  P+G +A++PG L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+T+  I GG A N I +   + GT   LS ES   +++RIE
Sbjct:  114 EPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNIIAQHAKLDGTIRTLSPESMEKVRKRIE 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26
Identity = 64/168 (38.10%), Postives = 100/168 (59.52%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +++ LG      EH   ++  ++ +FQPAEEG GGA  +LE+ +++  K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA +++  LQ +V+R  DPLDS V+T+ KI GG   N I +   + GT   LS +S   +K+RIE
Sbjct:  101 MSIALGLLTHFAEH--PIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDSAVITIGKISGGTVQNVIAEHARLEGTIRTLSVDSMKKVKERIE 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES   +K RIE
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES   +K RIE
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIE 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ KI GG   N I +   + GT   LS ES   +K RIE
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIE 265          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
DAPL_BACAA2.596e-2743.79Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACA23.391e-2741.67Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCN9.865e-2740.85Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACSK1.288e-2639.88Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK1.683e-2643.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACP21.683e-2642.48Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_GEOSW2.870e-2638.10Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACCR2.870e-2640.85Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC42.870e-2640.85Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC22.870e-2640.85Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
back to top