DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LISMC (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapL PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.687e-24
Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKES----FTPLKQRIEG 501
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +I GG   N I ++  + GT   LS E+    +T LKQ  +G
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKG 269          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LISW6 (Putative N-acetyldiaminopimelate deacetylase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dapL PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKES----FTPLKQRIEG 501
            K  ++ VFQPAEEG GGA  ++E+      + + I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +I GG   N I ++  + GT   LS E+    +T LKQ  +G
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESEEFAAWRPDTIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKG 269          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKES----FTPLKQRIEG 501
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +I GG   N I ++  + GT   LS E+    +T LKQ  +G
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKG 269          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LISIV (Putative N-acetyldiaminopimelate deacetylase OS=Listeria ivanovii GN=dapL PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 60/155 (38.71%), Postives = 92/155 (59.35%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKES----FTPLKQRIEG 501
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +G++A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +I GG   N I ++  + GT   LS E+    +T LKQ  +G
Sbjct:  116 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKG 270          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LISIN (Putative N-acetyldiaminopimelate deacetylase OS=Listeria innocua GN=dapL PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKES----FTPLKQRIEG 501
            K  ++ VFQPAEEG GGA  ++E+      + + I+GLH+ P   +G++A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +I GG   N I ++  + GT   LS E+    +T LKQ  +G
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFSEWRPDTIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKG 269          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_GEOTN (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapL PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 58/151 (38.41%), Postives = 90/151 (59.60%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            ++  ++ +FQPAEEG GGA  +LE+ ++   K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA  ++  LQ +V+R  DPLDS V+T+ KI  G   N I +   + GT   LS ++   +K+RIE
Sbjct:  116 IRDDLLFIFQPAEEGPGGAKPMLESDIMREWKPDMIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDPLDSAVITIGKITSGTVQNVIAEHARLEGTIRTLSIDAMQAVKRRIE 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.817e-24
Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEG 501
            T+ LG A +L +    L G V  +FQPAEE   GA  +++ G ++ V+ I G+HV P++P  +V  R G L A +   E  I G+ GH A P  +ID I  A+ VI +LQ  +SR  +PL   V+++ +I GG A N I   V + GT  +L  E+   L Q IEG
Sbjct:  109 TLGLGTAMVLSQMGHRLPGDVRFLFQPAEEIAQGASWMIQDGAMKGVSHILGVHVFPSIPAQQVGIRYGALTAAADDLEIFIQGESGHGARPHEAIDAIWIAAQVITALQQAISRTQNPLRPMVLSLGQISGGRAPNVIADQVRMAGTVRSLHPETHAQLPQWIEG 274          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 62/167 (37.13%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +T+ LGA + L +  + +   V+ VFQPAEEG GGA  +LE+   +  K + +F LH+ P LP+G V+S+ G L A +        G GGHAA P  + D  +AASN +V LQ +VSR  +PLD  V+T+ K++ G   N I ++  + GT  +   ++   +K ++
Sbjct:   99 MTIALGALEKLIQ--DPINDDVIFVFQPAEEGPGGAKPMLESEEFQQWKPDMMFALHIAPELPVGTVSSKAGLLFANTSELFIDFEGVGGHAAYPHLTKDMTVAASNFVVQLQQIVSRGLNPLDGSVITIGKMESGYVQNAIAETARLEGTIRSTDADAIDMIKSKL 263          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LEUMM (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=dapL PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 61/174 (35.06%), Postives = 100/174 (57.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESF----TPLKQRIEG 501
            +++ LG  +   EH+   K  +++ FQPAEE   G    ++ G+ E     +  +G+H  PNLP G +++  G L AG+   E  I G+GGHAA P    DPI+ ++ +I+ LQ +VSR+ DP++  VV++  I GG   N IP +V + GT  +++K+      T ++Q +EG
Sbjct:  105 MSLALGLVQYFSEHQP--KDNLIVFFQPAEESKSGGKLAVDLGIFEGEWHPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELEIDIHGQGGHAAYPHLGKDPIVISAELIMLLQTVVSRDVDPIEGGVVSLGMISGGFTNNVIPDTVHLAGTVRSMTKDGLDKMTTRIRQIVEG 276          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            ++  ++ +FQPAEEG GGA  +LE+  +++   + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AAS++I+ LQ +VSR  +PLDS V+T+ K+  G   N I +   + GT   LS E+   +K RIE
Sbjct:  111 IRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQLQTIVSRNVNPLDSAVITIGKLTSGTVQNVIAERARLEGTIRTLSPEAMEKVKGRIE 261          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
DAPL_LISMC2.687e-2439.35Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISW64.583e-2439.35Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMO4.583e-2439.35Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISIV4.583e-2438.71Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISIN4.583e-2438.71Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_GEOTN4.583e-2438.41Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
Y100_SYNY37.817e-2439.16Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
DAPL_OCEIH1.021e-2337.13Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_LEUMM1.021e-2335.06Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_ANOFW1.021e-2339.07Putative N-acetyldiaminopimelate deacetylase OS=An... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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