DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 60/148 (40.54%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGT 447
            MLLG AKI  + R++++G +  +FQ AEE   GGA ++++AGV++ V+ + G H+   L  G++    GP++A    F   I GKGGH A+P  +ID I   + V+ +LQH+VSR  DPL+  V++V +   G A N +P  V I GT
Sbjct:  112 MLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDPLEPLVLSVTQFVAGTAHNVLPGEVEIQGT 259          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACRJ (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus reuteri (strain JCM 1112) GN=dapL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23
Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG      EH+ +    ++  FQPAEE   G  +  E G+     K +  +GLH +P+LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ KI GG   N I     I GT   L++     +  R++
Sbjct:  104 MTVALGVLNYFSEHQPQ--DNILFFFQPAEESENGGKRAYELGLFSGKWKPDEFYGLHDNPDLPAGAIGCRMGTLFAGTTEVNIDLNGKGGHAAYPQNANDTVVAAASLILQVQTVISRSIDPIQSGVITLGKIDGGTIRNVIAGHTRIEGTIRGLTQTMIETIDNRLK 270          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACRD (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus reuteri (strain DSM 20016) GN=dapL PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23
Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG      EH+ +    ++  FQPAEE   G  +  E G+     K +  +GLH +P+LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ KI GG   N I     I GT   L++     +  R++
Sbjct:  104 MTVALGVLNYFSEHQPQ--DNILFFFQPAEESENGGKRAYELGLFSGKWKPDEFYGLHDNPDLPAGAIGCRMGTLFAGTTEVNIDLNGKGGHAAYPQNANDTVVAAASLILQVQTVISRSIDPIQSGVITLGKIDGGTIRNVIAGHTRIEGTIRGLTQTMIETIDNRLK 270          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +TM LG A+   +H+   K  +++ FQPAEE   G     + G+ E   + +  +G+H  PNLP G +++  G L AG+   +  + G GGHAA P  + DPI+ A+ +I+ LQ +VSR  DP+   VV+V  I GG A N IP  V   GT  ++++     +  RI
Sbjct:  106 MTMALGLAQYFSQHQP--KDNLIIFFQPAEEAESGGKVAYDMGLFEGKWRPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELKVDVIGTGGHAAYPHLAKDPIVIAAELIIQLQTVVSRSVDPIAGGVVSVGVINGGFANNVIPDQVHFEGTVRSMTRTGLETMLTRI 271          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACH4 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus helveticus (strain DPC 4571) GN=dapL PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23
Identity = 58/169 (34.32%), Postives = 95/169 (56.21%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +++ LG      E++   K  ++  FQPAEE   G  K  E G+ E   + +  +GLH +P LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ K++ G   N I     I GT   L+++    + QR++
Sbjct:  106 MSVALGLLSYFSENQP--KDNLLFFFQPAEESESGGKKAYEDGIFEGKFRPDEFYGLHDNPELPAGAIGCREGTLFAGTTEVNIDLIGKGGHAAFPQNANDTVVAAASLIMQIQTVISRSIDPIQSGVITLGKVRAGTIRNVIAGQTRIEGTIRGLTQKMILQIDQRLQ 272          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRU0 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dapL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22
Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +TM LG  + L E  ++ K  ++ +FQPAEE   G   + ++G L++   + ++ LHV P+LP+G +AS    L AG+   +    GKGGHAA P H+ D ++AAS  +  +Q +VSR  DP++  VVT   +  G   N I +  L+ GT   L+ +     ++R+
Sbjct:  100 MTMALGLLEALVE--KQSKHNMLFIFQPAEENEAGGMLMYQSGALDEWMPDEVYALHVRPDLPVGTLASNRATLFAGTCEVKVSFKGKGGHAAFPHHANDALVAASYFVTQVQTIVSRNVDPIEGAVVTFGSLHAGTTNNVISQEALLHGTIRTLTHDMSQLTQKRL 264          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACAC (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus acidophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22
Identity = 57/169 (33.73%), Postives = 93/169 (55.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG      E++   K  ++  FQPAEE   G  +  E G+ +   K +  +GLH +P LP G +  R G L AG+      + GK GHAA PQ++ D ++AA+N+I+ +Q ++SR  DP+ S V+T+ K+  G   N I     I GT   L+++    + +R++
Sbjct:  106 MTVALGLLSYFSENQP--KDNLLFFFQPAEESESGGKQAYEKGLFQGKFKPDEFYGLHDNPELPAGSIGCRMGTLFAGTTEINIDVIGKSGHAAFPQNANDTVVAAANLIMQIQTIISRSIDPIQSGVITLGKVNAGVIRNVIAGHTRIEGTIRGLTQKMILQIDRRLQ 272          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22
Identity = 60/168 (35.71%), Postives = 91/168 (54.17%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKV---NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +T+ LG      +H+   K  +++ FQPAEE   G  +  +AG  +     +  + LHV+P LP G++ASR G L AGS        GK GHAA PQ++ D I+AA+N + ++Q +VSR  DP++  VVT+ K   G A N I     I GT  + ++     + + I
Sbjct:  104 MTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDPIEGGVVTIGKFNAGKAMNIIAGKADIEGTIRSFTQSGMEIMTKHI 269          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni GN=hipO PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNA--IFGLHVDPNLPIGEVAS---RPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            T LL AAK L    +   G + L FQPAEEG GGA  ++E G+ EK ++  +FG H   N+P G       + G ++A S  +   + G+GGH + P+ + DPI AAS +IV+LQ +VSR  DP +S VV++     G AFN IP    I  +  AL  E+    +++I
Sbjct:  108 TSLLLAAKYLAS--QNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGWH---NMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQSIVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKI 271          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 54/169 (31.95%), Postives = 90/169 (53.25%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +    H+ +    ++  FQPAEE   G+ +   A +     + N  +GLH  P LP G +  R G L AG+      + GKGGHAA PQ + D ++A + +I  LQ +V+R  +P++  V+T+ K+  G   N I    +I GT   L+++    ++QR++
Sbjct:  105 MTVALGILEYFANHQPQ--DNLIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQLQTIVARNVNPIEGGVLTLGKVSAGNVRNVIADQAVIEGTIRGLTQKMILLIQQRVQ 271          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
AMAA_BACST1.021e-2340.54N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
DAPL_LACRJ2.970e-2334.91Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACRD2.970e-2334.91Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LEUCK3.879e-2336.31Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_LACH48.642e-2334.32Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRU04.289e-2234.73Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACAC4.289e-2233.73Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_OENOB5.602e-2235.71Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
HIPO_CAMJE2.129e-2139.05Hippurate hydrolase OS=Campylobacter jejuni GN=hip... [more]
DAPL_PEDPA8.089e-2131.95Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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