DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACPL (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus plantarum GN=dapL PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20
Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +++ LG      E+R      +V +FQPAEE   G  ++ E+G L+     + IF  H +PNLP G +  R G L AG+    A + GK GHAA P  + D ++A + ++  LQ +V+R  DP+ S VVT+     G   N I     I GT  AL++E    +++R+
Sbjct:  105 MSVALGILSYFAENRPATD--MVFMFQPAEENASGGQRLYESGALDGDWMPDEIFAFHDNPNLPTGAIGCRMGTLFAGTCEIHAHLSGKSGHAAYPHQANDMVVAGAALVSQLQTIVARNVDPIQSGVVTLGHFTAGTIGNVIAGEAQIDGTIRALTQEMNMHIQRRV 270          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACLS (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKE 468
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS VVT  K++ G   N I +   + GT  +L++E
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVVTFGKMEAGTTNNIIAERAFLHGTIRSLTQE 254          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKE 468
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS VVT  K++ G   N I +   + GT  +L++E
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVVTFGKMEAGTTNNIIAERAFLHGTIRSLTQE 254          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.015e-20
Identity = 60/175 (34.29%), Postives = 97/175 (55.43%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGG-GGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGF-HLASP 522
            TML+GAA +L ++    +  V LVFQPAEE   GGA   + AG L+ V+ IF LH DP+L +G++++R GP+ + +      +   GGH A P  + D I A + ++  L  ++ R  D   + V+T  K+  G   N +P+S  + GT  + S+E++  L+  +     HL +P
Sbjct:  514 TMLMGAASVLTKYPPPTR--VRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRIDARTATVLTWGKVAAGQVANSVPESGELVGTLRSASRETWASLEPLVTDAICHLLAP 686          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +T+ LG       HR   K  +  +FQPAEE   G  K+ ++G L++   + I+ LH +P LP G +  R G L AG+        GK GHAA P  + D ++A +  +  +Q +VSR  DP+ S VVT+     G   N I     I GT  AL++E+   +++R+
Sbjct:  102 MTVALGVLSYFASHRP--KYNMTFIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQSVVVTLGHFSAGTTGNVISGVCQIDGTIRALTQENNLLIQKRV 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_LACF3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19
Identity = 54/169 (31.95%), Postives = 92/169 (54.44%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG       H+   K  ++  FQPAEE   G  +  E G+ E   + +  +GLH +P L  G +  R G L AG+   +  + GK GHAA PQ + D ++AA+ +I+ +Q ++SR  +P+++ V+T+ K++ G   N I     I GT   L++E    + +R++
Sbjct:  104 MTVALGVLDYFASHQP--KDNLLFFFQPAEESEAGGQRAYELGLFEGKWRPDEFYGLHDNPALKTGVIGCRLGTLFAGTTEVDIDVLGKDGHAAFPQEANDAVVAAAALIMQVQTIISRSINPVEAGVITLGKLEAGTIRNVIAGHARIEGTIRGLTQEMIETIDRRLQ 270          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRZT (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.602e-19
Identity = 56/168 (33.33%), Postives = 92/168 (54.76%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEAGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.602e-19
Identity = 57/167 (34.13%), Postives = 88/167 (52.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            +T+ LG  K L + + +     + +FQPAEE   G   + E     +   +  + LHV+P+LP+G +++R G L A +      + GKGGHAA P  + D +LAA+N+I   Q +VSR  DP+   VVT      G A N I +   + GT   L+ E+    ++RI
Sbjct:  103 MTIGLGVLKELSQQQPD--NNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPVVGAVVTFGTFHAGTACNVIAEEATLSGTIRTLTAETNEQTQRRI 267          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRPS (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain CGSP14) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19
Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRP7 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain 70585) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19
Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
DAPL_LACPL1.802e-2034.52Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLS3.074e-2035.44Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLM3.074e-2035.44Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
CAAL4_RHOSR4.015e-2034.29Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_LACS15.243e-2034.13Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACF31.168e-1931.95Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRZT2.602e-1933.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_ENTFA2.602e-1934.13Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
DAPL_STRPS3.399e-1933.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP73.399e-1933.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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