DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.758e-18
Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            K  ++ +FQPAEE   G   + E G     + +  +GLHV P+  +G++A+    L AG+        GKGGHAA P ++ D ++AAS  I  +Q +VSR  DP++  VVT   +  G   N I ++  + GT   L+++    +++R++
Sbjct:  117 KNNLLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIEGGVVTFGSMHAGTTNNVIAETATLHGTIRTLTQDMSLLIQKRVQ 266          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT    Q G   N I  +  + GT  AL+++    +++R++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVK 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRTD (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dapL PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT      G   N I ++  + GT   L++E    +++R+
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRV 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRT2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dapL PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT      G   N I ++  + GT   L++E    +++R+
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRV 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: DAPL_STRT1 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dapL PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT      G   N I ++  + GT   L++E    +++R+
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRV 265          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: Y4TI_RHISN (Uncharacterized hydrolase y4tI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01500 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.086e-17
Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGG-GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            ++ +G A      R    G + + FQPAEE    G   VLE  +LE  +   G HV P++ +G+  +R G +   S  F+  + G   H + P + ID I  A+  +  +Q ++SRE    D  V+T+  I GG A N I   V++ GT    + E    L QR+
Sbjct:  119 SIAMGVALAFHRMRNNFAGKLRVFFQPAEEAEPLGGRTVLEERLLEGFDNAVGFHVTPSIQVGKFGAREGAVSKSSDQFKVTVSGSAAHGSTPHNGIDAITIAAAFVNEVQKVISREVPVDDRSVITIGTIHGGEATNIICPKVVMEGTIRTTNPELRPLLSQRV 283          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
DAPL_STRMU3.758e-1832.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZJ8.371e-1832.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR68.371e-1832.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ8.371e-1832.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPI8.371e-1832.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP28.371e-1832.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRTD1.865e-1733.56Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT21.865e-1733.56Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT11.865e-1733.56Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
Y4TI_RHISN7.086e-1731.52Uncharacterized hydrolase y4tI OS=Rhizobium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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