DY305339

Overview
NameDY305339
Unique NameDY305339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.982e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.982e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 2.589e-45
Identity = 91/153 (59.48%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+T   +P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ             SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.589e-45
Identity = 92/135 (68.15%), Postives = 103/135 (76.30%), Query Frame = 1
Query:  376 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            FFDMT+GGQPAGRI+MELF DV P+TAENFRALCTGEKGIG SGK + Y+GS FHRVIP FM Q            ESIYG+KFADENF+ KHT PG+LSMANAGPGTNGS FF  T  T  L+GKH VF +V +
Sbjct:    5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVE 138          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 3.381e-45
Identity = 90/148 (60.81%), Postives = 104/148 (70.27%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKA 801
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEA 141          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 3.381e-45
Identity = 89/137 (64.96%), Postives = 100/137 (72.99%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            KVFFD+T+G   AGRIVMELF +VTP+TAENFRALCTGEKG+GK+GKPLH+KGS FHRVI  FM Q            ESIYG KFADENF  KH  PG+LSMANAGP TNGS FF       WL+GKH VF +V +
Sbjct:    4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVE 140          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 4.416e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 4.416e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 4.416e-45
Identity = 86/137 (62.77%), Postives = 100/137 (72.99%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            KV+FD+ + G+ AGR+V+ LF    P+TAENFRALCTGEKG+GKSGKPLHYKGS FHR+IP FM Q            ESIYG KFADENF  KHTGPG+LSMAN+G  TNGS FF  T  T WL+G+H VF +V Q
Sbjct:   33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQ 169          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 9.837e-45
Identity = 90/153 (58.82%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  +LFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF  V + + + +A  + G
Sbjct:    1 MVNPIVFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFG 146          
The following BLAST results are available for this feature:
BLAST of DY305339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PPIA_PIG1.982e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN1.982e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIA_MOUSE2.589e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
CYPX_USEUD2.589e-4568.15Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPIA_RABIT3.381e-4560.81Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPI2_SYNY33.381e-4564.96Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIA_SAGOE4.416e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR4.416e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
CP19D_ARATH4.416e-4562.77Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIA_FELCA9.837e-4558.82Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CA03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305339 ID=DY305339; Name=DY305339; organism=Citrus clementina; type=EST; length=1271bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAAAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCATTTCTTCCGCTGTACGGGCCAGACCGAATGGCTCAATGGG
AAGCACTTTGTGTTCTGTCAAGTCTTCCAATGGATTGGACTCCACAAGGC
CTTCTAAAAGCGGGGTCCTATTTCCGAAAGGAACTAAATCCCCTCCATGA
ACCGGTGATATGCGAGAAATTGTCTTAAAATTAATGTTGATAAGGATAAC
CCTCAAAAAGAACCTGTGAGACGCCGATCGGAATGGGCATTTTGGATTCA
CTTTATATTGTGGCCCACCCCTGCGGGAAACCTTATCCCCCTATAAGCAG
ATATCCCCAGCATAAAAACCCGTGACAGCCAGTAACAAGCTACCTCCCGA
TAGCTGGCACTTGCTTATAAAATACCTATAAAGACCACTTTATCACTACC
AGACCCATATTAACCCCATAGAGTTTTGACCCTATGACATACCAGAAAAA
CGTTAAAGATTGATAAAGACATTAAATTTTGTTAATGCAGAGCGGACGCT
TCACGTATCTGATAATACACTTAAAGCCTCCTATTCATTATAGGATTAAG
ATCCGTTACTAAATACAATAC
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