DY305339

Overview
NameDY305339
Unique NameDY305339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.893e-36
Identity = 75/144 (52.08%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  343 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG  FF    + +WL+GKH VF ++
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKI 144          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.893e-36
Identity = 78/136 (57.35%), Postives = 93/136 (68.38%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            P VFFD+++G  PAGRI MELF D+TP+TAENFR LCTGE  I  +  P  YK ++FHRVIP FM Q             SIYG++F DENF  KHTGPG+LSMAN+GP TNG  FF  T   E+L+GKH VF +V
Sbjct:   13 PIVFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRV 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.893e-36
Identity = 75/144 (52.08%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  343 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG  FF    + +WL+GKH VF ++
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKI 144          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 4.893e-36
Identity = 76/135 (56.30%), Postives = 88/135 (65.19%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            +V+FD+   GQP GR+V +L+ D+ P+TAENFRALCTGEKG G       Y GS FHRVIP FM Q            +SIYG KF DENF K H  PG+LSMANAGP TNGS FF  T    WL+GKH VF +V
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEV 130          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.391e-36
Identity = 78/146 (53.42%), Postives = 93/146 (63.70%), Query Frame = 1
Query:  346 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            + +K PNP VFFD+T+GG+  GRI MELF  +TPRTAENFR  CTGE      G+P  YK S FHRVI  FM Q             +IYG+ +F DENF+ KH  PG+LSMAN+GP TNG  FF  T  T +LN KH VF QV +
Sbjct:    7 SSAKTPNPVVFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVE 151          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.391e-36
Identity = 79/140 (56.43%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            PK FFD+++GG+PAGRIV EL++DV P+TAENF  LC G  G  KS    PL YKGS FHRVI  FMCQ            ESIYG KF DENF  KH  P +LSMANAG  TNGS  F     T  L+GKH VF +V Q
Sbjct:    6 PKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQ 145          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.090e-35
Identity = 75/143 (52.45%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHK 798
            K+FFD+ +GG+ AGRIV+ LF D  P+T ENF+ L TG KG G       Y+GS FHR+IP FM Q             SIYGSKF DE+F  KH GPG+LSMANAGP TNGS FF CT  T WL+ +H VF  V + + + K
Sbjct:   83 KIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVK 218          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.859e-35
Identity = 76/138 (55.07%), Postives = 90/138 (65.22%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVF 765
            SK  NP VFFD+   G+P GRI+MELF+++ P+TAENFRALCTGEKG G       +K S FHRV+P F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN S FF    + E L+ KH VF
Sbjct: 2888 SKDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVF 3018          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.172e-35
Identity = 77/138 (55.80%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVF 765
            SK  NP VFFD+   G+P GRI MELF+++ PRTAENFRALCTGEKG G       +K S FHRVIP F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN S F     + E L+ KH VF
Sbjct: 3059 SKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVF 3189          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.172e-35
Identity = 80/158 (50.63%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  313 VRV*FVFFSPINQSKMP--NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            V + FV    ++ +K P    KV+FD+  GG+P GRIVM L+    P+TAENFRAL TG+   G+      Y+GSSFHR+I  FM Q            +SIYGSKF DENF  KHTGPG+LSMANAG  TNGS FF CT +T WL+ +H VF  V +
Sbjct:   25 VAICFVLSPGVDAAKGPVITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLE 181          
The following BLAST results are available for this feature:
BLAST of DY305339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PPIH_HUMAN4.893e-3652.08Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_CRYNE4.893e-3657.35Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
PPIH_BOVIN4.893e-3652.08Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
CYPH_YEAST4.893e-3656.30Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIH_ASPOR6.391e-3653.42Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPID_KLULA6.391e-3656.43Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
CYPB_VICFA1.090e-3552.45Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
RBP2_MOUSE1.859e-3555.07E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
RBP2_HUMAN3.172e-3555.80E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPIB_CRYNE3.172e-3550.63Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CA03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305339 ID=DY305339; Name=DY305339; organism=Citrus clementina; type=EST; length=1271bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAAAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCATTTCTTCCGCTGTACGGGCCAGACCGAATGGCTCAATGGG
AAGCACTTTGTGTTCTGTCAAGTCTTCCAATGGATTGGACTCCACAAGGC
CTTCTAAAAGCGGGGTCCTATTTCCGAAAGGAACTAAATCCCCTCCATGA
ACCGGTGATATGCGAGAAATTGTCTTAAAATTAATGTTGATAAGGATAAC
CCTCAAAAAGAACCTGTGAGACGCCGATCGGAATGGGCATTTTGGATTCA
CTTTATATTGTGGCCCACCCCTGCGGGAAACCTTATCCCCCTATAAGCAG
ATATCCCCAGCATAAAAACCCGTGACAGCCAGTAACAAGCTACCTCCCGA
TAGCTGGCACTTGCTTATAAAATACCTATAAAGACCACTTTATCACTACC
AGACCCATATTAACCCCATAGAGTTTTGACCCTATGACATACCAGAAAAA
CGTTAAAGATTGATAAAGACATTAAATTTTGTTAATGCAGAGCGGACGCT
TCACGTATCTGATAATACACTTAAAGCCTCCTATTCATTATAGGATTAAG
ATCCGTTACTAAATACAATAC
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