DY306209

Overview
NameDY306209
Unique NameDY306209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1083
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY306209 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.360e-11
Identity = 45/182 (24.73%), Postives = 74/182 (40.66%), Query Frame = 3 
Query:  297 NDDELSQKALNEANEAKLEGNKLFGEGKYEEALLQYEVALRXXXXXXXXXXXXXXXXKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLEPLAXXXXXXXXXXXIGKLKEMGNS 842
            ++  ++ K L      K EGN+ F    Y+ A   +  AL                                P++  + S  +SNR    + L +  E+I +CT A+ ++P Y KA IRRA+   K E++E+A+ D +K    DP N + +R I   +              +G  KE G +
Sbjct:  223 SESRVALKRLRSIESKKKEGNEYFQSKNYQAAYDSFTEALSID-----------------------------PKLETMNSQLYSNRAAALVHLNRISEAINDCTSAVTIDPNYGKAYIRRAQCQMKQENYEDAVRDYEKAQSLDPENGELQRNIKEAKIAHKKSLRKDYYKILGVSKEAGET 375
[Close]
BLAST of DY306209 vs. ExPASy Swiss-Prot
Match: PAS1_ARATH (Peptidyl-prolyl isomerase PASTICCINO1 OS=Arabidopsis thaliana GN=PAS1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 9.777e-11
Identity = 46/158 (29.11%), Postives = 75/158 (47.47%), Query Frame = 3 
Query:  315 QKALNEANEAKLEGNKLFGEGKYEEALLQYEVALRXXXXXXXXXXXXXXXXKEGQSASEKKEVAPAPE-----MAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN-QAKRTILRLE 770
            Q  ++EA++ +  GN+LF EGK+E A  +YE  LR                       E   V P  E       + R++ H N   C LK+G++ +SI+ C K LE  P ++K L RR  A+     +++A  D   +++ D S+   A   +L+L+
Sbjct:  394 QSIMDEADKIRSTGNRLFKEGKFELAKAKYEKVLR-----------------------EFNHVNPQDEDEGKIFGDTRNMLHLNVAACLLKMGEWRKSIETCNKVLEAKPGHVKGLYRRGMAYIAGGEYDDARNDFNMMIKVDKSSEADATAALLKLK 528
The following BLAST results are available for this feature:
BLAST of DY306209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DNJC7_DICDI3.360e-1124.73DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
PAS1_ARATH9.777e-1129.11Peptidyl-prolyl isomerase PASTICCINO1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA96DC10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306209 ID=DY306209; Name=DY306209; organism=Citrus clementina; type=EST; length=1083bp
AAATTAAATAATTTGTTGAGTTTCTTCATATCATTCGTAGGAGAGCCAGA
CCCCTGAAGGCTAAACGCTAATAAATCCTATCTCCAACTCTTCAGTCAAC
TGAAAAAATGGTGCTGATAGAACAAGAGCCAGAAGACGCAAAAGAGACTG
TCGCAGCAAATCCTCCAAAAGCAGCATCGACAGCAAACGAAAACGGCGAT
GTATCCGACGGATTCGAAACCGCCAGTGAACGCGACGTCAGCGACGACGA
CGACGACGACGAGGAGCCGAAACAAGAAGAACAGCCTGTTGCTCTAAACG
ACGACGAATTGAGCCAGAAAGCGTTAAATGAAGCGAATGAGGCGAAACTT
GAAGGGAATAAGTTGTTTGGTGAAGGAAAATATGAGGAGGCGTTGTTACA
GTATGAGGTAGCTTTGCGAGTGGCATCGGTGCCGGAGAGAGCGGAATCAG
CTTCGGCGCCGGAGGCGAAGGAAGGGCAGTCGGCATCGGAGAAGAAGGAA
GTGGCGCCGGCGCCGGAAATGGCAGAGCTGCGTTCCATATGCCATTCGAA
TCGTGGAATATGCTTTTTGAAGCTTGGAAAATTCGAGGAGTCTATCAAGG
AATGCACAAAGGCGTTGGAGCTTAATCCTACATATATGAAAGCTCTGATC
AGAAGAGCAGAGGCGCATGAAAAGCTTGAACACTTTGAAGAGGCTATTGC
TGATATGAAGAAAATCTTGGAATTTGATCCTTCAAATAATCAAGCCAAGA
GAACCATTCTTCGTTTGGAACCACTGGCAGAAGAAAAACGCGAAAAGATG
AAGGAAGAGATGATTGGAAAGCTAAAAGAAATGGGTAACTCTATCCTGGG
CCGTTTTGGGATGAGCACTGACAACTTCAAAGCTGTTAAAGATCTGAACA
CTGGCGCCTACTNCATATCATTCCAGAAATAGGTTGGTTCANTATAACTT
TTATTTTTTATTTGGAACCTAGTGTGAGAAAGACTGCACTCAGGCCATAT
AGTGAAACAGGGAATCCTCCCTTTGGGCATCACACTGGTAATGGTGATTA
AAGGTCTTACCAACCTGGAGCAAACAGTTTTAA
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