DY306868

Overview
NameDY306868
Unique NameDY306868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1251
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306868 vs. ExPASy Swiss-Prot
Match: PMO25_SCHPO (Mo25-like protein OS=Schizosaccharomyces pombe GN=pmo25 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.797e-31
Identity = 70/212 (33.02%), Postives = 121/212 (57.08%), Query Frame = 3
Query:  195 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLS*NYNWVF 830
            M  LF  +P++  D+VR   D +     + D ++S       E+ K ++ L+  L G +E EP ++  + L+ + ++ N   LL+  LPKL  E++KD   + + L R+ V S+    DY+ A+  +  +L++ Y   ++A   G++LREC RH+++   +L S+    FF  IQ  +FD+A+DA +TFK +L  HKS VAEF+S +++  F
Sbjct:    1 MSFLFNKRPKSTQDVVRCLCDNLPKLEINNDKKKS-----FEEVSKCLQNLRVSLCGTAEVEPDADLVSDLSFQIYQSNLPFLLVRYLPKLEFESKKDTGLIFSALLRRHVASRYPTVDYMLAHPQIFPVLVSYYRYQEVAFTAGSILRECSRHEALNEVLLNSRDFWTFFSLIQASSFDMASDAFSTFKSILLNHKSQVAEFISYHFDEFF 207          

HSP 2 Score: 31.187 bits (69), Expect = 3.797e-31
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  916 LDRSNSVVMTRYVSSRGNLRILM 984
            L+R+N  VMTRY+SS  NL+++M
Sbjct:  234 LNRANRSVMTRYISSAENLKLMM 256          

HSP 3 Score: 23.483 bits (49), Expect = 3.797e-31
Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  854 LESSNYITRRTAVQLFG 904
            L+S NY+T+R +++L G
Sbjct:  214 LKSENYVTKRQSLKLLG 230          
BLAST of DY306868 vs. ExPASy Swiss-Prot
Match: DEE76_CHLPR (Degreening-related gene dee76 protein OS=Chlorella protothecoides GN=DEE76 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.325e-31
Identity = 66/183 (36.07%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  294 ESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSK-LIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLS*NYNWVFCRI 839
            ESK++  + ++ K I  +K  ++G  E     E    + +E  R   +  L+T L  L+ E RKD  Q+   + R  +        DY+ A+ D+L  L  GYE+ ++AL+ G M RECIRH+ +A++VLE    ++ F+ + + +F++A+DA ATFK+LLTRHK  VA FL  NY   F ++
Sbjct:   19 ESKQDRVVEDISKAIMSIKEAIFGEDEQSSSKEHAQGIASEACRVGLVSDLVTYLTVLDFETRKDVVQIFCAIIRITLEDGGRPGRDYVLAHPDVLSTLFYGYEDPEIALNCGQMFRECIRHEDIAKFVLECNLFEELFEKLNVQSFEVASDAFATFKDLLTRHKQLVAAFLQENYEDFFSQL 201          

HSP 2 Score: 30.8018 bits (68), Expect = 8.325e-31
Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1
Query:  916 LDRSNSVVMTRYVSSRGNLRILMNPP*KIPQEYPEGNIFWFFKL-VWWPNKTKP 1074
            LDR N  +M +YVS   NL ++MN   K      +   F  FK+ V  PNKTKP
Sbjct:  225 LDRVNVKIMMQYVSDVNNLILMMNLL-KDSSRSIQFEAFHVFKVFVANPNKTKP 277          

HSP 3 Score: 23.8682 bits (50), Expect = 8.325e-31
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  854 LESSNYITRRTAVQLFG 904
            L S NY+TRR +++L G
Sbjct:  205 LTSDNYVTRRQSLKLLG 221          
BLAST of DY306868 vs. ExPASy Swiss-Prot
Match: HYMA_EMENI (Conidiophore development protein hymA OS=Emericella nidulans GN=hymA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.404e-20
Identity = 64/237 (27.00%), Postives = 111/237 (46.84%), Query Frame = 3
Query:  210 KSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQR-QQVHSKL----IASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMK-----------------------KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLS*NYNWVFCR 836
            + + R P D+VR  +DL++     +    SK ED   EL K + ++K ++ G  E E  ++    L      E+ L  L   L  L  EARKD   + +++ R +  H       + S  +    +++  L  GYE++  A+  G +LRE ++   +A  +L  Q  +                       +FF +I    F+++ADA  TF+E+LTRHKS V  +L+ N+++ F +
Sbjct:    7 RGRSRQPSDVVRSIKDLLLRLREPSTA--SKVED---ELAKQLSQMKLMVQGTQELEASTDQVHALVQAMLHEDLLYELAVALHNLPFEARKDTQTIFSHILRFKPPHGNSPDPPVISYIVHNRPEIIIELCRGYEHSQSAMPCGTILREALKFDVIAAIILYDQSKEGEPAIRLTEVQPNVPQRGTGVFWRFFHWIDRGTFELSADAFTTFREILTRHKSLVTGYLATNFDYFFAQ 238          

HSP 2 Score: 32.3426 bits (72), Expect = 1.404e-20
Identity = 21/53 (39.62%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  826 FFAEYNSKLVGIFQLHYQTNSCSAVWETYKLDRSNSVVMTRYVSSRGNLRILM 984
            FFA++N+ LV       +  S   + E   LDR+N  VM RYV S  NL++ M
Sbjct:  235 FFAQFNTFLVQSESYVTKRQSIKLLGEIL-LDRANYSVMMRYVESGENLKLCM 286          
BLAST of DY306868 vs. ExPASy Swiss-Prot
Match: HYM1_YEAST (Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-13
Identity = 52/214 (24.30%), Postives = 98/214 (45.79%), Query Frame = 3
Query:  207 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELC-KNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT-------DMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVA-EFLS*NYN 821
            +K  P+TP D  R   + +   +  +  +++KR  K+ E C K +   K  + G+++  P  EA  +L     R +    L+     L  EAR++   + +        +K +  DYL +    + +++   E         D+ L  G M+ ECI+++ + R +L+   + KFF++ +L NF+I+ ++        T H   V+ EF S   N
Sbjct:   16 WKKNPKTPSDYARLIIEQLNKFSSPSLTQDNKR--KVQEECTKYLIGTKHFIVGDTDPHPTPEAIDELYTAMHRADVFYELLLHFVDLEFEARRECMLIFSICLGYSKDNKFVTVDYLVSQPKTISLMLRTAEVALQQKGCQDIFLTVGNMIIECIKYEQLCRIILKDPQLWKFFEFAKLGNFEISTESLQILSAAFTAHPKLVSKEFFSNEIN 227          

HSP 2 Score: 24.2534 bits (51), Expect = 4.619e-13
Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  922 RSNSVVMTRYVSSRGNLRILM 984
            RSN+ +M  Y++S  NL+++M
Sbjct:  261 RSNNALMNIYINSPENLKLIM 281          
The following BLAST results are available for this feature:
BLAST of DY306868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PMO25_SCHPO3.797e-3133.02Mo25-like protein OS=Schizosaccharomyces pombe GN=... [more]
DEE76_CHLPR8.325e-3136.07Degreening-related gene dee76 protein OS=Chlorella... [more]
HYMA_EMENI1.404e-2027.00Conidiophore development protein hymA OS=Emericell... [more]
HYM1_YEAST4.619e-1324.30Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BG10RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306868 ID=DY306868; Name=DY306868; organism=Citrus clementina; type=EST; length=1251bp
GACAACTCAGACAGCAAAATTAAATTCGAAAGCTGAAACCCTAAAGCCTA
ATTAGAAGAAGAAGATACACAATAGGAATCTGTGCGTCAAAGCCGAAAGC
TGAGGCGCTCTCAGCCTCGGCGAGTCAATCGGTCCAGCGCCTCTCGAGCT
CAGCCAGTTCAAGTTCGATTAACGAATTAGACCCTAACACAAAAATGAAG
GGACTTTTCAAATCCAAGCCTCGTACTCCCGTCGACATCGTCCGCCAAAC
TCGGGATCTTATTATTTACGCCAATCGCAGCGCAGATGTTCGTGAATCGA
AGCGCGAAGACAAGATGGCAGAGTTATGTAAAAACATCAGGGAGTTAAAG
TCAATACTTTATGGCAATAGTGAATCTGAGCCAGTTTCAGAGGCATGTGC
ACAATTGACTGCAGAGTTCTTCAGGGAAAACACGTTACGGCTTTTGATAA
CTTGTCTTCCAAAGTTGAACTTGGAGGCAAGGAAAGATGCCACTCAGGTT
GTTGCTAATTTACAGAGGCAACAAGTTCACTCAAAGTTGATTGCCTCTGA
CTACTTAGAAGCAAACATAGATCTTTTGGATATTCTGATAGCTGGTTATG
AAAACACAGACATGGCTTTACATTATGGTGCTATGCTTAGGGAGTGTATT
CGTCATCAGAGTGTTGCAAGATATGTGTTGGAATCCCAGCACATGAAGAA
GTTTTTTGACTATATACAGCTTCCAAATTTTGACATTGCTGCAGATGCTG
CTGCAACTTTTAAGGAACTGTTGACAAGGCACAAATCCACTGTGGCCGAA
TTTCTTTCCTAGAATTATAACTGGGTTTTTTGCAGAATATAACTCAAAAC
TGGTTGGAATCTTCCAATTACATTACCAGACGAACAGCTGTTCAGCTGTT
TGGGAGACATATAAACTGGATCGGTCAAATTCAGTAGTGATGACNAGATA
TGTGAGCTCAAGGGGAAATTTGAGGATACTCATGAATCCTCCTTAAAAGA
TCCCGCAAGAGTATCCCGAAGGAAACATTTTCTGGTTTTTCAAGCTGGTT
TGGTGGCCAAATAAAACAAAACCTCCCGGGACAAATAAAGGCCTAACCCC
CGTTGGCCCACAAAAGCAAAGGCCTTCTTCCCGGGGGTTGTTTTGGGGGG
GAATTTTTCCAAACATTGGGAAAAAAAAAAAGGGAAGAAAAAACAAAGAT
TTTGTGGAGGGGGGCAAAAACAAAAAAAACCCCCTCTGGGGGGGGGTGTG
G
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