DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.024e-27
Identity = 81/218 (37.16%), Postives = 119/218 (54.59%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISD--TKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDR------LLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI-DSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQG 629
            A+D  + NL   L+   +   D      + + +   +S+  K+ +N     G TA+ A    ++      L  AN GD+R V+CR G AI +S DHK    +E +R+   GG ++     R+ GVLAV+RA GD  LK+ V A P   E  I +   EF I+A DGLWDVV+++EAV  ++    P EAA RL++ A +R S DN+TC+VV +  N G
Sbjct:  116 ASDYCQKNLHKVLLEKVRNEPDRLVTDLMDETFVEVNSKIAKATHNDI--CGCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQN---RINGVLAVTRALGDTYLKELVSAHPFTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRNFVSPREAAVRLVEFALKRLSTDNITCIVVNLTRNPG 328          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.950e-27
Identity = 82/226 (36.28%), Postives = 129/226 (57.08%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNR-DAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-KPIQDPEE---AAKRLMQEAYQRGSADNLTCVVVPVLANQGGPP 638
            AA  ++ NL   ++    F  + +  +  ++  TDS+F +  ++QN   +G+TA TA+  G  LLVAN GD RAV+ R G AI +S+DH+    +ER+RIE  GG+V       + G LAV+RA GD  L+           + A+PE++   +    EFLI+ SDG+WD  +N+ AV    K +Q+  +     K++++EA +RG++DNLT V+V    +Q  PP
Sbjct:  105 AAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGASDNLTAVMVSF--HQEAPP 325          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.950e-27
Identity = 92/235 (39.15%), Postives = 124/235 (52.77%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRH-PK-----FISDTKSAIADAYSHTDSEFLKSENNQNR--DAGSTASTAIPVGDRLLVANEGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNLTCVVVPV 614
            A+     NL  NLIR  PK          K  + D + HTD EFLK  ++Q      GSTA+  + V + L +AN GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VV +
Sbjct:  137 ASKFAAQNLHQNLIRKFPKGDGISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQRREGKPTVDARYEAACNRLANKAVQRGSADNVTVMVVRI 368          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.159e-27
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            GSTA  A+   +R++VAN GDSRAV+CR G  + +S DHKPD+ DE +RI+ AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  213 GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.159e-27
Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 3
Query:  147 AGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            AGSTA  A+    +++VAN GDSRAVI R G  +A+S DHKPD+ DE +RIE AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  212 AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.159e-27
Identity = 94/235 (40.00%), Postives = 126/235 (53.62%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRH-PK--FIS---DTKSAIADAYSHTDSEFLKSENNQNR--DAGSTASTAIPVGDRLLVANEGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNLTCVVVPV 614
            A+     NL  NLIR  PK   IS     K  + D + HTD EFLK  ++Q      GSTA+  + V + L +AN GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VV +
Sbjct:  159 ASKFAAQNLHQNLIRKFPKGDIISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDDKIQTREGKPAVDARYEAACNRLANKAVQRGSADNVTVMVVRI 390          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.737e-27
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PIQ------DP--EEAAKRLMQEAYQRGSADNLTCVVVPVLANQ 626
            GSTA  A+     ++V+N GDSRAV+ RG  A+ +S DHKPD+ DE  RIE+AGG  + W G  RV GVLA+SR+ GDR LK YV+ +PE+         E LILASDGLWDV+ N+E   + +             P+       DP  + AA  L   A Q+GS DN++ +V+ + A +
Sbjct:  326 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQR 505          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.737e-27
Identity = 73/202 (36.14%), Postives = 115/202 (56.93%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQGG 632
            F    + +I +A+   D   L  +   +R +G+TA  A+  G +LLVAN GD RAV+CR G A+ +SRDH+P    E +RI + GG++       + GVL+V+RA GD  +K        ++A+PE Q+  +    EFLI+  DG+WDV++++ AV +++       DPE  A+ L  EA +  + DNLT +V+   +  GG
Sbjct:  148 FYESVEKSIHNAFLSADLA-LADDLAISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDDPERCARELAMEAKRLQTFDNLTVIVICFGSELGG 345          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.737e-27
Identity = 92/235 (39.15%), Postives = 124/235 (52.77%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRH-PK-----FISDTKSAIADAYSHTDSEFLKSENNQNR--DAGSTASTAIPVGDRLLVANEGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--------------KPIQDP--EEAAKRLMQEAYQRGSADNLTCVVVPV 614
            A+     NL  NLIR  PK          K  + D + HTD EFLK  ++Q      GSTA+  + V + L +AN GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I              KP  D   E A  RL  +A QRGSADN+T +VV +
Sbjct:  159 ASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKPAVDARYEAACNRLANKAVQRGSADNVTVMVVRI 390          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.799e-27
Identity = 77/184 (41.85%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----------------AVAMIKPIQ------DP--EEAAKRLMQEAYQRGSADNLTCVVVPVLANQ 626
            GSTA  A+     ++VAN GDSRAV+CRG   + +S DHKP++ DE  RIE  GG V+    +RV GVLA+SR+ GD+ LK Y++  PE+         + LILASDGLWDV++NEE                 A A     Q      DP  + AA  L + A Q+GS DN+T VV+ + A++
Sbjct:  256 GSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHR 439          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP2C1_SCHPO3.024e-2737.16Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]
P2C27_ORYSJ3.950e-2736.28Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
ILKAP_BOVIN3.950e-2739.15Integrin-linked kinase-associated serine/threonine... [more]
P2C49_ORYSJ5.159e-2753.66Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C09_ORYSJ5.159e-2754.84Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
ILKAP_MOUSE5.159e-2740.00Integrin-linked kinase-associated serine/threonine... [more]
P2C16_ARATH6.737e-2742.54Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C02_ORYSJ6.737e-2736.14Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
ILKAP_RAT6.737e-2739.15Integrin-linked kinase-associated serine/threonine... [more]
P2C53_ORYSJ8.799e-2741.85Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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