DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.149e-26
Identity = 79/215 (36.74%), Postives = 117/215 (54.42%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY--------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AAD +  NL   ++    F  + + A++ A+  TD+ F  + + N +  +G+TA  A+ VG  LLVAN GD RAV+C  G AI +SRDHKP    E+ RIE +GG+V       + G L V+RA GD  ++          + A+PE+    +    EFLI+  DG+WDV  ++ AV      ++   DP    K L+ EA +R S DNL+ VV+
Sbjct:  118 AADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVY---DGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSGDNLSVVVI 329          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.960e-26
Identity = 76/207 (36.71%), Postives = 118/207 (57.00%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK-------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQGGPPFP 644
            F+ + +++   A++  D   +  E   +   G+TA TA+ +G  LLVAN GD RAV+CR G A+ +S DH+     ER+RIED GG+        + GVLAV+RA GD  LK         +++DPEI + ++    EFLILA DG+WDV++++ AV+ ++       DP + A  L +EA +  S+DN+T +V+   +    P  P
Sbjct:  157 FLEELENSHRKAFALADLA-MADETIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYF---EDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSSDNMTVIVICFSSVPSSPKQP 359          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.560e-26
Identity = 74/226 (32.74%), Postives = 116/226 (51.33%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNLTCVVV----PVLANQGGPPFPGPA 653
            AA     ++ +N    P+  ++  +A+ +A+  TD  FL+    +   +G+T   A+  G  L VA  GDS+ ++ + G  + +   HKP++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV + E   ++     +   +    A+ L+  A  RGS DN+T +VV    P+   +GG    G A
Sbjct:  202 AARYASVHVHTNASHQPELRTNPAAALKEAFRLTDEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGSEDYLLLACDGFFDVVPHHEVTGLVHGHLLRHKGNGMRIAEELVAVARDRGSHDNITVMVVFLREPLELLEGGVQGTGDA 427          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.344e-26
Identity = 89/235 (37.87%), Postives = 123/235 (52.34%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRH-PK-----FISDTKSAIADAYSHTDSEFLKSENNQNR--DAGSTASTAIPVGDRLLVANEGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE----------------AAKRLMQEAYQRGSADNLTCVVVPV 614
            A+     NL  NLIR  PK          K  + D + HTD EFLK  ++Q      GSTA+  + V + L +AN GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I    + E+                A  RL  +A QRGSADN+T +VV +
Sbjct:  159 ASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKSAADARYEAACNRLANKAVQRGSADNVTVMVVRI 390          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 4.367e-26
Identity = 74/181 (40.88%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PI--------QDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQ 626
            GSTA  A+     ++V+N GDSRAV+ RG +++ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GD+ L+ +V+ DPE+         E LILASDGLWDV++N+EA    +             P+        Q  + AA+ L + A Q GS DN++ +V+ + A +
Sbjct:  326 GSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGA-RVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKAQR 505          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.659e-25
Identity = 72/215 (33.49%), Postives = 117/215 (54.42%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA  ++ NL   ++    F  + +  +  ++ H D++F K+       +G+TA TA+  G  LL+AN GD RAV+ R G AI +S DH+P    E+ R+E  GG+V       + G+L V+RA GD  L+           + A+PE++   +    EFLI+ SDG+WDV +N+  V      ++   D +   + +++EA +RG+ DNLT V+V
Sbjct:  116 AAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAKT----TLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGATDNLTAVLV 323          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.649e-23
Identity = 70/190 (36.84%), Postives = 110/190 (57.89%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAI-PVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVP 611
            F+   K+  + A+   D+  L S        G+TA+ A+   G  L+VA+ GDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE    ++  +   FL+L +DG+  +V ++E    +    DP+EAA  + ++A Q G+ DN T VVVP
Sbjct:  164 FLEIDKAFASYAHLSADASLLTS--------GTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPKEAAHSVTEQAIQYGTEDNSTAVVVP 345          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.649e-23
Identity = 69/190 (36.32%), Postives = 109/190 (57.37%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAI-PVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVP 611
            F+   K+    A+   D+  L S        G+TA+ A+   G  L++A+ GDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVVP
Sbjct:  164 FLEIDKTFARHAHLSADATLLTS--------GTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVP 345          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.460e-23
Identity = 71/203 (34.98%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   18 KHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAI-PVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLE-FLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVP 611
            +H++   L++   F+   K+    A+   D+  L          G+TA+ A+   G  L+VA+ GDSRA++CR G    ++ DH P++ +E+ RI+ +GGFV W   G   V G LA++R+ GD  LK   V+A+PE +   +  + + FL+L +DG+  +V ++E   +I    DP+EAA+ L ++A Q G+ DN T +VVP
Sbjct:  154 EHDMEKVLVK--AFLEINKAFARHAHLSVDASLLT--------CGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVP 346          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.460e-23
Identity = 64/160 (40.00%), Postives = 100/160 (62.50%), Query Frame = 3
Query:  147 AGSTASTAI-PVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVP 611
            +G+TA+ A+   G  L+VA+ GDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVVP
Sbjct:  186 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVP 345          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C57_ORYSJ1.149e-2636.74Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C13_ARATH1.960e-2636.71Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
PPM1F_MOUSE2.560e-2632.74Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
ILKAP_HUMAN3.344e-2637.87Integrin-linked kinase-associated serine/threonine... [more]
P2C07_ARATH4.367e-2640.88Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C54_ORYSJ1.659e-2533.49Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
PPM1K_MOUSE2.649e-2336.84Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
PPM1K_BOVIN2.649e-2336.32Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1K_XENLA3.460e-2334.98Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1K_HUMAN3.460e-2340.00Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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