DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.708e-23
Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICR---GGNAIA---VSRDHKPDQTDERQRIEDAGGFVMWA----GTWRVGGV------LAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA 566
            K A    +S  D +   S +  +  +G TA TA+  GD L++AN GDSRAVI      GN +    +S D KP+  +E +RI+ + G +       G +RVG        LAVSRAFGD  LK + +V++PE+    I    +FLILA+DG+WDV+TN EAV +++ +++  ++AKRL++ A
Sbjct:  144 KQACLKTFSIIDLDLKISPSIDSYCSGCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERA 325          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.929e-22
Identity = 64/171 (37.43%), Postives = 96/171 (56.14%), Query Frame = 3
Query:  147 AGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQR--------GSADNLTCVVV 608
            +GSTA  AI   D L+VAN GDSR V+ R G A  +S+DHKPD   E++RI +AGGF++ AG  RV G L ++RA GD  LK         Q V A+PE+    +    EF++LA DG+WD ++++E V  +    + E++   + ++               DN+T ++V
Sbjct:  158 SGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIV-AG--RVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEMNTEDSLSAVCEKLLDHCLAPVSGGDGCDNMTVIIV 325          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.454e-21
Identity = 64/158 (40.51%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHK----------------------------------------PDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEA 503
            GSTA  A+ V DRL+V+N GDSRAV+CR G+ + +S DHK                                        PD+ DE+ RIE  GG V++    RV G+LA+SRA GD+ LK  V+ +P+I   V     E LILASDG+WDV++NE A
Sbjct:  241 GSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPDITITVRTVDDECLILASDGMWDVISNETA 398          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.230e-21
Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +   K+ I   +   D     F    N  +R +GSTA   +     +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E V     EF++LA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V
Sbjct:   99 VESVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSVVLV 293          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 4.230e-21
Identity = 66/176 (37.50%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAA---KRLMQEAYQRG--SADNLTCVVVPVLANQG 629
            G TA   +    +++V N GD+R VI R G AIA+S DHKP+  +E QRI  AGG V ++ G+ RV   +AVSRA GD         R  +Q +   PEI+ + +    EFL++A DG+WDV+ N+  V  ++  + +  E +   + L+QEA  R   S DN++ ++V  L  +G
Sbjct:  151 GCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAITRDPPSTDNMSVILVRFLHPEG 326          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.423e-21
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 3
Query:   90 AYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICR-----GGNA----IAVSRDHKPDQTDERQRIEDAGGFVMWAG-------TWRV---GGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA 566
            A +  D+E   S       +G TA + +  GD L+VAN GDSRAV+       GG A    + ++ D KP+   ER+RI +  G V            WR    G  LA+SRAFGD  +K Y V++ PE+    I +   F+ILA+DG+WDVV+NEEAV ++    + E+AAKRL++ A
Sbjct:  147 ACAAVDAELRASRRLDAVHSGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNLPQERERIMECNGRVQCLADEPGVHRVWRPDREGPGLAMSRAFGDYCVKDYGVISAPEVTHRRITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFA 325          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.231e-20
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFL----KSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNLTCVVV 608
            DT+ A  D     + E +    + +     D+G+TA  A+  G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++
Sbjct:  297 DTEEAEEDDEEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIII 504          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 2.099e-20
Identity = 67/206 (32.52%), Postives = 102/206 (49.51%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNLTCVVV 608
            DT+ A  D         ++ +     D+G+TA  A+  G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++
Sbjct:  297 DTEEAEEDDDEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIII 500          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PP2C_LEICH (Protein phosphatase 2C OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.742e-20
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTAS--TAIPVGDR--LLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDR--------LLKQYVVADPEIQ-EEVIDSSLEFLILASDGLWD-VVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D E++ S     R+ GST +   A+  G++  L V N GDSR V C  G  + ++ DHKP+   ERQRIE+  G V      RV G LAVSRAFGDR         L+Q V+A  ++Q ++    S +F++L  DG+++    NEE VA +K       D  E A R+ +EA +RGS DN++C++V
Sbjct:   94 DQEWMDS----GREGGSTGTFFVALKEGNKVHLQVGNVGDSRVVACIDGVCVPLTEDHKPNNEGERQRIENCAGRV---ENNRVDGSLAVSRAFGDREYKLGSGSQLEQKVIALADVQHKDFTFDSNDFVLLCCDGVFEGNFPNEEVVAYVKQQLETCNDLAEVAGRVCEEAIERGSRDNISCMIV 272          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.581e-20
Identity = 69/199 (34.67%), Postives = 101/199 (50.75%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            + + K+ I   +   D     F    N  +R +GSTA   +     +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF++LA DG+WDV++NEE      + ++   D E     ++     +GS DN++ V+V
Sbjct:   99 VENVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLV 293          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C41_ARATH7.708e-2339.01Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C70_ORYSJ2.929e-2237.43Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C37_ORYSJ1.454e-2140.51Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
PPM1B_MOUSE4.230e-2135.68Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
P2C42_ORYSJ4.230e-2137.50Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C48_ORYSJ9.423e-2139.11Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
PPM1G_MACFA1.231e-2032.38Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_MOUSE2.099e-2032.52Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PP2C_LEICH2.742e-2039.25Protein phosphatase 2C OS=Leishmania chagasi PE=2 ... [more]
PPM1B_RAT3.581e-2034.67Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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