EG026522

Overview
NameEG026522
Unique NameEG026522
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.587e-25
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            + S  HAA++FG Y Y GY PNRPT + CN+  E P   +++     P+   L TF  Q+Q+   ++I +V S H+ DE YLG+     W +D     AFE+F   L ++E  I   N+    +NR+G   VPY LL P SE G+TGKG+P
Sbjct:  706 IASALHAALHFGLYSYAGYLPNRPTLS-CNLMPE-PGSVEYEELKTNPDKVFLKTFVPQLQSLLEISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEEGLTGKGIP 854          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.252e-24
Identity = 59/149 (39.60%), Postives = 86/149 (57.72%), Query Frame = 2
Query:    8 SGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            S  HAAVNFGQY YGG   NRPT +R  +   +    +++   + P+ A L T   + Q    ++++++LS H+ DE YLG+   P W  D     AF++F  KL ++E  +  RN D KLRNR G   +PY LL P S+ G+T +G+P
Sbjct:  706 SALHAAVNFGQYPYGGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIP 852          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.789e-24
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIE-PAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            + S  HAAVNFGQY YGGY  NRPT +R  +   +    ++    +  E A L T   +      + I++VLS H+ DE+YLG+ IE   W  D V   AF++F  KL E+E  +  RN D  LRNR G   +PY LL P SE G+T +G+P
Sbjct:  712 IASALHAAVNFGQYPYGGYILNRPTKSRKFMP--EKGTPEYDDLAKNYEKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIP 861          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24
Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFS-----EPGVTGKGVP 454
            + S  HAAVNFGQY Y G+ PNRPT +R  +   +P  +++    E  + A L T   Q+Q    ++I+++LS HS DE YLG+   P W  D     AF++F  +L  +E  I  RN D + +NR G   +PY LL P +     E G+TGKG+P
Sbjct:  728 IASALHAAVNFGQYPYAGFLPNRPTVSRRFMP--EPGTDEYAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIP 881          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.214e-24
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 454
            + S  HAAVNFGQY Y GY PNRP+ +R  +   +P  +++      PE   + T   Q+QA   +++L++LS HS DE YLG+   P W  D     AF++F  +L E+E  + A N DP  +NR G    PY LL P +        G++ +G+P
Sbjct:  711 IGSALHAAVNFGQYPYAGYLPNRPSVSRRPMP--EPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.060e-23
Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = 2
Query:    8 SGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            S  HAAVNFGQY YGG   NRPT +R  +  E  ++  +   ++  + A L T   + Q    ++++++LS H+ DE YLG+   P W  D     AF+KF  KL E+E  +  +N DP L +R G   +PY LL P S+ G+T +G+P
Sbjct:  713 SALHAAVNFGQYPYGGLILNRPTLSRRLLPEEGTAE--YDEMVKSSQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIP 859          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.808e-23
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE-PGVTGKGVP 454
            + S  HAAVNFGQY YGG+  NRPT  R  +   +P  +++       + A L T   +++A   ++++++LS H+ DE YLG+   P W  +     AF++F  KL E+E  I  RN D  LRNRNG   +PY +L P  E  G+T +G+P
Sbjct:  708 IASALHAAVNFGQYPYGGFILNRPTITRRLLP--EPGTKEYGELTSNYQKAYLRTITGKVEAIVDLSVIEILSRHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIP 857          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.361e-23
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2
Query:    8 SGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            S  HAAVNFGQY YGG+  NRPT++R  +   +    +++  ++  + A L T  S+ Q    ++++++LS H+ DE YLG+   P W  D     AF+KF  KL E+E  +  +N D  L NR G   +PY LL P SE G+T +G+P
Sbjct:  715 SALHAAVNFGQYPYGGFILNRPTSSRRLLP--EKGTPEYEEMVKSHQKAYLRTITSKFQTLVDLSVIEILSRHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE-GLTCRGIP 860          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.692e-21
Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA---LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE-------PGVTGKGVP 454
            + S  HAAVNFGQY Y G+ PNRPT +R  +   +P  E++       + A    ++T  SQ Q    ++++++LS HS DE YLG+   P W  D     AF++F  +L+++E  I   N +  L+NRNG   +PY LL P +         G+T  G+P
Sbjct:  714 IASALHAAVNFGQYPYAGFLPNRPTVSRRPMP--EPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872          
BLAST of EG026522 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.431e-21
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 2
Query:    2 VTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 454
            + S  HAAVNFGQY YGG   NRPT +R     E  S E +    + PE   L T   + +    + ++++LS H+ DE YLG ++    W  D     AF++F  KL E+E  +  +N D  LRNR G   +PY LL P SE G+T +G+P
Sbjct:  699 IASALHAAVNFGQYPYGGLILNRPTISR-RFMPEKGSPE-YDALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIP 848          
The following BLAST results are available for this feature:
BLAST of EG026522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXB_SOLLC9.587e-2540.40Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOX3_SOYBN1.252e-2439.60Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOX1_LENCU2.789e-2442.11Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOX5_ARATH3.643e-2439.74Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX2_ORYSJ6.214e-2437.58Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX2_PEA1.060e-2338.93Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOXA_PHAVU1.808e-2338.82Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOX2_SOYBN2.361e-2339.60Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX4_ORYSJ1.692e-2136.02Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOX4_SOYBN6.431e-2139.47Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DH03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026522 ID=EG026522; Name=EG026522; organism=Citrus clementina; type=EST; length=590bp
GGTAACATCTGGTCACCACGCAGCTGTTAACTTCGGCCAATACATTTACG
GAGGCTATTTCCCCAATAGGCCAACCACTGCAAGATGCAACATTGCCACT
GAAGATCCATCTGATGAACAATGGAAATTCTTCCTTGAAAAACCTGAAAA
TGCACTTTTGAATACCTTCCCTTCCCAGATTCAAGCTACTAAAGTTATGG
CTATTCTTGATGTTTTATCGACTCATTCTCCTGATGAGGAGTATTTAGGA
AAAGAAATAGAGCCAGCATGGCGTGAGGATCCGGTTATAAATGCAGCATT
TGAAAAGTTTAGAGGCAAGTTAATGGAGCTTGAAGGGATTATTGATGCAA
GGAATGCAGATCCCAAGTTGAGGAATAGAAATGGAGCTGGGATGGTGCCA
TATGAGCTCTTGAAGCCATTTTCGGAACCTGGTGTTACAGGAAAAGGAGT
TCCGTACAGCATCTCTATCTAGAGTTGAAAATGTTGTTGCAATCGCTCGA
ATGTTGTGTCAATAAAAACTTTTGAGAATGAGTTCAAGAATGAATCAAAT
AAATTGCAGTTAATGTTGCTGTCGGTGTTATATTATTAAC
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