EH406135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_LONON (60S ribosomal protein L38 OS=Lonomia obliqua GN=RpL38 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.789e-15 Identity = 37/55 (67.27%), Postives = 49/55 (89.09%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARRKDA+SV+IK++ + VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 15 ARRKDAKSVEIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_ARTSF (60S ribosomal protein L38 OS=Artemia sanfranciscana GN=RPL38 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.948e-15 Identity = 37/55 (67.27%), Postives = 48/55 (87.27%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARRKDA+S KIK++ D KFK+RCS++LYTL + DSEKA+KLK+SLPPGL V++L Sbjct: 15 ARRKDAKSCKIKKNPDNTKFKLRCSRFLYTLVITDSEKAEKLKKSLPPGLQVKEL 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_CAEEL (60S ribosomal protein L38 OS=Caenorhabditis elegans GN=rpl-38 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 6.463e-15 Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARRKDA+SVKIK++ + KFKVRC+ YLYTL V D +KA+KLKQSLPPG+ V++L Sbjct: 15 ARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKEL 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_DROYA (60S ribosomal protein L38 OS=Drosophila yakuba GN=RpL38 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.456e-14 Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARR DAR+VKIK++ KFK+RCS++LYTL V D EKADK+KQSLPPGL V+++ Sbjct: 15 ARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEV 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_DROME (60S ribosomal protein L38 OS=Drosophila melanogaster GN=RpL38 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.456e-14 Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARR DAR+VKIK++ KFK+RCS++LYTL V D EKADK+KQSLPPGL V+++ Sbjct: 15 ARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEV 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_OSTOS (60S ribosomal protein L38 OS=Ostertagia ostertagi GN=rpl-38 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.219e-13 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 169 ARRKDA+ VKIK++ VKFKVRCS+YL+TL V D +KA+KLKQSLPPG+ V +L Sbjct: 15 ARRKDAKIVKIKKNSLNVKFKVRCSRYLFTLVVNDKDKAEKLKQSLPPGIQVIEL 69
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38A_SCHPO (60S ribosomal protein L38-1 OS=Schizosaccharomyces pombe GN=rpl38a PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12 Identity = 35/60 (58.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRDV-VKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 181 ARRKDA S +IK++ + VKFK+RCSKYLYTL V D++KA+KL+QSLPP L+V ++ +++ Sbjct: 15 ARRKDATSARIKKNTNKDVKFKLRCSKYLYTLVVADAKKAEKLRQSLPPDLTVTEVGKKA 74
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38_NEUCR (60S ribosomal protein L38 OS=Neurospora crassa GN=rpl-38 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12 Identity = 33/60 (55.00%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 8 RRKDARSVKIKRSRDV--VKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 181 RRKDA + +IK+++ +KFKVRC KYLYTL + DS+KA+KLK SLPP L++ D+ +R+ Sbjct: 16 RRKDASAARIKKNKATQQIKFKVRCQKYLYTLVLKDSDKAEKLKASLPPSLTIADVAKRN 75
BLAST of EH406135 vs. ExPASy Swiss-Prot
Match: RL38B_SCHPO (60S ribosomal protein L38-2 OS=Schizosaccharomyces pombe GN=rpl38b PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.662e-11 Identity = 31/60 (51.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 5 ARRKDARSVKIKRSRD-VVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 181 A R DA S ++K++++ VKFK+RCS+YLYTL V D++KA+KL+QSLPP L+V ++ +++ Sbjct: 15 AHRGDATSARVKKNQNKAVKFKLRCSRYLYTLVVADAKKAEKLRQSLPPALTVTEVGKKA 74 The following BLAST results are available for this feature:
BLAST of EH406135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH406135 ID=EH406135; Name=EH406135; organism=Citrus clementina; type=EST; length=462bpback to top |