EH406136

Overview
NameEH406136
Unique NameEH406136
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT5_HUMAN (Zinc transporter 5 OS=Homo sapiens GN=SLC30A5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1 
Query:    1 VCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 408
            V LHVLAD++ S G+I+++  +   G   A+ LC   +++ +F+ V+PL K    +LL   PP      L     +I   E +       FW      V G++ +QV   V ++ I+Q V G+  D GV +LT+Q++
Sbjct:  592 VFLHVLADTLGSIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEY-EKELHIALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNLTIQVE 727
The following BLAST results are available for this feature:
BLAST of EH406136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ZNT5_HUMAN8.343e-1131.39Zinc transporter 5 OS=Homo sapiens GN=SLC30A5 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1AB01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406136 ID=EH406136; Name=EH406136; organism=Citrus clementina; type=EST; length=605bp
GTTTGCTTGCATGTTCTTGCAGATTCTATTCGCAGTGCAGGTTTGATATT
GGCATCTTGGTTTTTGTCCCTTGGGGTCCAGAATGCTGAAGTTTTGTGTT
TGGGGATAGTTTCAGTTGCAGTCTTCATGCTTGTCATGCCACTATTCAAA
GTGACTGGTGGTATCTTGCTTCAGATGGCACCTCCTAGCATTCCATCTTC
AGCATTGAGTAAATGTTGGAGACAGATTGTTTCTCGGGAAGATGTTACAG
AAGTTTCCCAAGCCCGTTTTTGGGAGCTAGTGCCTGGCCATGTTGTTGGT
TCTCTCTCACTTCAGGTGAAGAAGGGAGTGGATGACCGCCCAATACTTCA
ATTTGTGCATGGTTTATACCACGATTTAGGAGTACAAGATTTGACAGTGC
AAATTGATTATGATTGAGCTTTAATCATTTGTCTTTCAGTATTTCTTGCA
ATTGACCGTTAAAGAATAGCTTTAGATTGAAGCCATTATCACTTGTAGCT
GCTGTTGTCCCTCAAGCACTTGTGTTAGTAGTAGCAAGATTTTGAATCAA
TTTCTATGTAGTTAAAGATCATTTTCAGTAATACACATACTGTAATTTAT
TCATC
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