EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACC4 (50S ribosomal protein L2 OS=Bacillus cereus (strain B4264) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACC2 (50S ribosomal protein L2 OS=Bacillus cereus (strain G9842) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_RHORT (50S ribosomal protein L2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33 Identity = 71/129 (55.04%), Postives = 93/129 (72.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG+L R+AG A+++ + + + +RL SG +L+ C AT+G VSNP + +KL KAG+SRW+GRRP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K G +T S Sbjct: 138 GTIIHNVEMKPGKGGQLARSAGCYAQLIGKD-AGYAQLRLSSGELRLVRGECLATVGAVSNPDNQNEKLGKAGRSRWMGRRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKRTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_METSB (50S ribosomal protein L2 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33 Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTI+HNIE+ G+GG +VR+AGT A+++ + ++RL SG ++LI +C AT+G VSNP H + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIVHNIEMKIGKGGAMVRSAGTFAQVVGRD-QGYVIIRLNSGEQRLIHGQCFATVGAVSNPDHMNASIGKAGRSRWLGRRPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_PARL1 (50S ribosomal protein L2 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 67/127 (52.76%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HN+E+ PG+GG++ R+AGT +++ + L+RL SG ++++ C A+IG VSNP H + KAG++RWLG+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 138 GTIVHNVEMKPGKGGQIARSAGTYVQLVGRD-QGYALLRLSSGEQRMVPATCMASIGAVSNPDHSNITIAKAGRNRWLGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_HALOH (50S ribosomal protein L2 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=rplB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGK 361 GTIIHNIE+ PG+GG+L RAAGT A+IL + + ++LPSG +LI C+ATIG V N H + KAG+ RWLG+RP VRGVAMNPVDHPHGGGEGR+ + GR +TPWGK Sbjct: 138 GTIIHNIELKPGKGGQLARAAGTMAQILAKE-GKYAHIKLPSGEVRLISLECKATIGQVGNIDHENISIGKAGRKRWLGKRPHVRGVAMNPVDHPHGGGEGRTST----GRHPVTPWGK 251
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_DESMR (50S ribosomal protein L2 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT++HNIE+NPG+GG++ RAAGT A+++ + + L+RLPSG + + + C ATIG V N H + KAG++RWLG+RP VRGVAMNPVDHP GGGEG KSSG GR +TPWGKP K GYKT Sbjct: 138 GTLLHNIELNPGRGGQMCRAAGTYAQLVAKE-GKYALLRLPSGEVRNVLSTCLATIGQVGNVMHENISIGKAGRNRWLGKRPEVRGVAMNPVDHPLGGGEG--KSSG--GRHPVTPWGKPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_HYDS0 (50S ribosomal protein L2 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 74/127 (58.27%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT IHNIE+NPG+G KLVRAAG SA+++ + + VRLPSG +LI+ +C ATIG V H KL KAG+SRWLG RP VRG AMNPVDHPHGGGEG++K G+ +PWG K GYKT Sbjct: 148 GTFIHNIELNPGRGAKLVRAAGLSAQVIGK-IEGYAQVRLPSGEVRLINDKCMATIGVVGLAEHELVKLGKAGRSRWLGMRPNVRGTAMNPVDHPHGGGEGKTK-----GKHPESPWGWKTK-GYKT 267
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33 Identity = 71/129 (55.04%), Postives = 91/129 (70.54%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTI+HN+E+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+SRWLGR+P RGV MNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRSRWLGRKPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GRABC (50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplB PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33 Identity = 70/127 (55.12%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTIIHNIE+ PG GGK+ R+AGT A+++ + + + ++L SG +++ C AT+G VSNP + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K GYKT Sbjct: 138 GTIIHNIEMKPGAGGKIARSAGTYAQLVGKD-AGYAQIKLMSGELRVVRAECYATVGAVSNPDNSNIHIGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GYKT 258 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |