EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_RHOPA (50S ribosomal protein L2 OS=Rhodopseudomonas palustris GN=rplB PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTI+HN+E+ G+GG+L R+AGT A+I+ + ++R+ SG ++LI RC A IG VSNP H + KAG+ RWLGRRP RGV MNP+DHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIVHNVELKIGKGGQLARSAGTYAQIVGRD-HDYVILRMNSGEQRLIHGRCIAAIGAVSNPDHMNISIGKAGRKRWLGRRPHNRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_NOVAD (50S ribosomal protein L2 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 370 GTIIHN+E+ PG+GG++ R+AGT +++ +VRL SG ++ + C T+G VSNP +G + L KAG++RWLG+RP+ RGVA NPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 138 GTIIHNVEMKPGKGGQIARSAGTYVQLVGRDRG-MVIVRLNSGEQRYLRGDCMGTVGAVSNPDNGNQNLAKAGRNRWLGKRPLTRGVAKNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_LISMO (50S ribosomal protein L2 OS=Listeria monocytogenes GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT+IHNIE+ PG+GG+LVR+AGTSA++L + + L+RL SG ++I CRATIG V N H + KAG+SRW+G+RP VRG MNP DHPHGGGEG++ GR S ++PWGKP GYKT Sbjct: 138 GTVIHNIEMKPGKGGQLVRSAGTSAQVLGKE-GKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPI----GRKSPMSPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_LISMF (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT+IHNIE+ PG+GG+LVR+AGTSA++L + + L+RL SG ++I CRATIG V N H + KAG+SRW+G+RP VRG MNP DHPHGGGEG++ GR S ++PWGKP GYKT Sbjct: 138 GTVIHNIEMKPGKGGQLVRSAGTSAQVLGKE-GKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPI----GRKSPMSPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_LISMC (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT+IHNIE+ PG+GG+LVR+AGTSA++L + + L+RL SG ++I CRATIG V N H + KAG+SRW+G+RP VRG MNP DHPHGGGEG++ GR S ++PWGKP GYKT Sbjct: 138 GTVIHNIEMKPGKGGQLVRSAGTSAQVLGKE-GKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPI----GRKSPMSPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_LISIN (50S ribosomal protein L2 OS=Listeria innocua GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT+IHNIE+ PG+GG+LVR+AGTSA++L + + L+RL SG ++I CRATIG V N H + KAG+SRW+G+RP VRG MNP DHPHGGGEG++ GR S ++PWGKP GYKT Sbjct: 138 GTVIHNIEMKPGKGGQLVRSAGTSAQVLGKE-GKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPI----GRKSPMSPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GLUOX (50S ribosomal protein L2 OS=Gluconobacter oxydans GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HNIE+ G GGKL R+AGT A+++ + + + V+L SG +L+ C AT+G VSNP + + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWG P K GYKT Sbjct: 138 GTIVHNIELKQGAGGKLARSAGTYAQLVGKD-AGYAQVKLQSGELRLVRGECMATVGAVSNPDNMNQHMGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGVPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_CLOCE (50S ribosomal protein L2 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 G++IHNIE+ PG+GG++VRAAG +A+++ + + +RLPSG +++ CRAT+G + N H K+ KAG+ RW+G RP VRGV MNPVDHPHGGGEG+S GR S +TPWGKP GYKT Sbjct: 138 GSMIHNIELKPGKGGQMVRAAGNAAQLMAKE-GEYAQIRLPSGEVRMVRINCRATLGQIGNIEHENVKIGKAGRKRWMGVRPTVRGVVMNPVDHPHGGGEGKSPI----GRPSPVTPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_THESQ (50S ribosomal protein L2 OS=Thermotoga sp. (strain RQ2) GN=rplB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT++HN+E PG+GG++ RAAGT +I+ + ++ L+R+PSG + + +C AT+G V N H + KAG+ RWLGRRP VRGVAMNPVDHPHGGGEGR K G+H +PWG P K GYKT Sbjct: 139 GTLVHNVEFTPGKGGQIARAAGTYCQIMAKE-GNYALLRMPSGELRKVHIKCYATVGVVGNEDHKNEVHGKAGRVRWLGRRPHVRGVAMNPVDHPHGGGEGRGK--GHH---PTSPWGLPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_THEP1 (50S ribosomal protein L2 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT++HN+E PG+GG++ RAAGT +I+ + ++ L+R+PSG + + +C AT+G V N H + KAG+ RWLGRRP VRGVAMNPVDHPHGGGEGR K G+H +PWG P K GYKT Sbjct: 139 GTLVHNVEFTPGKGGQIARAAGTYCQIMAKE-GNYALLRMPSGELRKVHIKCYATVGVVGNEDHKNEVHGKAGRVRWLGRRPHVRGVAMNPVDHPHGGGEGRGK--GHH---PTSPWGLPTK-GYKT 258 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |