EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOK1 (Threonyl-tRNA synthetase OS=Clostridium kluyveri (strain NBRC 12016) GN=thrS PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49 Identity = 85/177 (48.02%), Postives = 125/177 (70.62%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID ++D +GR WQC T+Q+DF +P++FD+ Y+ ++ EK RP+MIHR V GS+ERF G+LIEHYAG FP W++P+Q +V+ +TD Q +Y EV K LK N IR E E++ IR A+ K+P M ++G KE+ + ++VRSR G++G M ++DFI ++K + + Sbjct: 457 GAFYGPKIDFHLKDCIGRTWQCGTVQLDFQMPEKFDLNYIGADGEKHRPVMIHRVVFGSIERFIGILIEHYAGAFPAWIAPVQVQVMNITDAQADYVAEVAKTLKENNIRVECDIRNEKIGYKIREAQMHKVPYMIILGDKEMKDKNISVRSRKEGDIGAMSLEDFILKLKEEIDKK 633
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_NATTJ (Threonyl-tRNA synthetase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=thrS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49 Identity = 86/171 (50.29%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GAFYGPKID ++EDA+GR WQCSTIQ+DF LP+RFD+ Y+ + +K RP+MIHR + G++ERFF +LIEHY G FPLWL+P QA ++P+ D +EY ++ K+L++ GIRA++ E++ IR+A+ +K+P M +VG EV+ +TV+VR+R G++G+ V + + IK Sbjct: 459 GAFYGPKIDFQLEDAIGRSWQCSTIQLDFLLPERFDLTYIGEDGQKHRPVMIHRVIYGAIERFFALLIEHYEGKFPLWLAPRQAVIIPIADRHMEYGKDITKQLESEGIRADLDQRNEKIGYKIRDAQLKKVPYMLIVGDDEVENKTVSVRTREDGDIGSKSVAELVDEIK 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_GEOSM (Threonyl-tRNA synthetase OS=Geobacter sp. (strain M21) GN=thrS PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.495e-49 Identity = 92/176 (52.27%), Postives = 126/176 (71.59%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAE-ICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATEN 530 GAFYGPKID+K+ DAL R+WQC+TIQ DF LP+RFD+ YVD++ EKKRP+M+HR +LG++ERF GVLIEH+AG+FP WL+P+QA ++ VTD Q+ Y KL+ GIR + E+L IR A+ QKIP M VVG KEV++ + R R G L +M + FI+ I++ ++ Sbjct: 459 GAFYGPKIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFKIREAQLQKIPYMLVVGDKEVESGMLAPRFRDGKNLESMTPEQFITFIENEVKS 634
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESDG (Threonyl-tRNA synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=thrS PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48 Identity = 90/175 (51.43%), Postives = 122/175 (69.71%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATE 527 GAFYGPKID+K+ D LGR+WQC+T+Q DF LP RFD+VY+ + E+ RP+M+HR +LGS+ERF GVL EH+AG FP WL+P+QAR+L VTD Q E+ E L GIR E+ E+L +R A+ +KIP + V+G KEV+A+ V VR R G LG +D+ + I++ E Sbjct: 457 GAFYGPKIDVKLRDCLGREWQCATVQCDFTLPDRFDLVYIGQDGERHRPVMVHRVILGSVERFIGVLTEHFAGAFPTWLAPVQARLLTVTDAQNEFAEEARAALMAQGIRVEVDTRNEKLGYKVREAQLEKIPYILVIGDKEVEARGVNVRLRKGDNLGLKTLDEVVDIIRADCE 631
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_ACIAD (Threonyl-tRNA synthetase OS=Acinetobacter sp. (strain ADP1) GN=thrS PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 91/177 (51.41%), Postives = 123/177 (69.49%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRA-EICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKI+ ++D LGR WQC TIQ DFNLP R D +V ++E+ +P+M+HRA+LGS ERF G+LIEHYAG P WL+P+QA V+ +TD+Q E C +V+ KLK NG+RA E++ IR ++IP + V+G +EV+ TV VR+R G LGTM +D F+ +KSA R Sbjct: 458 GAFYGPKIEFSLKDCLGRVWQCGTIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQACVMNITDSQAEACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAER 634
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYMTH (Threonyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 90/172 (52.33%), Postives = 123/172 (71.51%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAE-ICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 GAFYGPK+D + DALGRKWQC+T+Q+DF LP +FD+ Y+ + ++ RP+MIHRA++G+LERF G+L EHYAG+FPLW++P+QARVLP+TD Y EV+ KL+ G+R E E++ IR AE KIP + VVG KE +A V VR R +LG M + DF++ +S Sbjct: 460 GAFYGPKLDFDVTDALGRKWQCATVQLDFQLPIKFDLTYIGEDGKEHRPVMIHRAIMGTLERFIGILTEHYAGNFPLWMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVEGDYRNEKVGYKIREAELLKIPFILVVGDKEAEAGAVAVRRRGMKDLGPMPLADFLALAQS 631
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_NITOC (Threonyl-tRNA synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 92/171 (53.80%), Postives = 123/171 (71.93%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRI 512 GGAFYGPKID+KIEDA+GRKWQCST+Q+DFNLP+RF + YV + + RPIMIHRAVLGSLERFFGVLIEHY G FP WL+P+Q V+ +TD Q Y +V + ++ G R+ + E++ IR ++IP + V+G +EV QTV VR+R+ +LG M +D F+ + Sbjct: 459 GGAFYGPKIDIKIEDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGVLIEHYEGKFPPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGFRSLLDLRNEKIGFKIREHILRRIPYLLVIGDREVANQTVAVRTRYSQDLGAMSLDAFMEHL 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_NAUPA (Threonyl-tRNA synthetase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 90/176 (51.14%), Postives = 126/176 (71.59%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATE 527 GGAFYGPKID+KI DA+GRKWQC TIQVDFNLP+RFDI YVD N+E+ RP+MIHRA++GS ERF +L EHYAG+FP +++PI+A +P+ ++ +EY ++ K+L I EI + L K IRNAEK+++ + ++G +EV+ TV +R R E M +F+ IK+ +E Sbjct: 433 GGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDITYVDENNERVRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIAESHVEYAKKLQKELLEADINTEIFASNDSLNKRIRNAEKRRVGYVVIIGDEEVETGTVAIRDRKKREQYKMTKGEFVEMIKNLSE 608
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_COLP3 (Threonyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKI+ + D LGR WQC T+Q+DF LP+R YV ++E+ P+MIHRA+LGSLERF G+LIE + G FP WLSPIQ ++ +TD Q YC +V+KKLK NG RA+I E++ IR +++P + VVG KE+++ ++VR+R G +LG M VDDFI+++ ++R Sbjct: 459 GAFYGPKIEFTLMDCLGRAWQCGTVQLDFALPERLGATYVGEDNERYTPVMIHRAILGSLERFIGILIEEFTGKFPTWLSPIQTTIMNITDKQAPYCEKVVKKLKENGFRAKIDLRNEKIGFKIREHTLKRVPYLLVVGDKEMESGEISVRTRSGEDLGKMSVDDFIAKLSDEVKSR 635
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_ACIF5 (Threonyl-tRNA synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVD 494 GGAFYGPKIDLKI+DA+GRKWQCST+Q+DFNLP+RF + YV + +K PIM+HRA+ GS+ERFFGVLIEHY G FP+WL+P+QA VLP+++ EY V L GIRAE E++ IR +++P + VVG +E +A TV VR R G +LGT+ +D Sbjct: 459 GGAFYGPKIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARKVPIMVHRAIFGSIERFFGVLIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRGIRAETDLRNEKIGYKIRAHTLRRVPYLLVVGEREKEAGTVAVRDRNGQDLGTLSID 623 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |