FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9337 contig Ccv1_Contig9337:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.773e-56
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 1 
Query:  283 HGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            +GG+YVQYNVYGNLFEVS KYVPP+RPIGRGA GIVCAA NSET EEVAIKKIGNAF NIIDA+RTLREIKLL+HM+H+NVIAI DIIRPP+ D FNDV+IVYELMDTDLH I+RS+Q
Sbjct:   19 NGGRYVQYNVYGNLFEVSKKYVPPLRPIGRGASGIVCAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQPDNFNDVHIVYELMDTDLHHIIRSNQ 136

HSP 2 Score: 34.6538 bits (78), Expect = 6.773e-56
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH ++FLYQLLRG +YVH
Sbjct:  141 DHSRFFLYQLLRGLKYVH 158
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 8.826e-56
Identity = 88/120 (73.33%), Postives = 110/120 (91.67%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+HGG+++QYN++GN+FEV++KY PPI PIG+GAYGIVC+A NSET E VA+KKI NAFDN IDA+RTLREIKLLRHM+HENV+AI+DI+ PP+++ FNDVYI YELMDTDLHQI+RS+Q
Sbjct:   32 LSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQ 151

HSP 2 Score: 38.891 bits (89), Expect = 8.826e-56
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  156 EHCQYFLYQILRGLKYIH 173
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.549e-55
Identity = 87/120 (72.50%), Postives = 110/120 (91.67%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+HGG+++QYN++GN+FEV++KY PPI PIG+GAYGIVC+A NSET E VA+KKI NAFDN IDA+RTLREIKL+RHM+HENV+AI+DI+ PP+++ FNDVYI YELMDTDLHQI+RS+Q
Sbjct:   39 LSHGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQ 158

HSP 2 Score: 38.891 bits (89), Expect = 2.549e-55
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  163 EHCQYFLYQILRGLKYIH 180
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.368e-55
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            LT+ G+YV YNV GN+FE+SSKY+PPI PIGRGAYGIVC A NSET EEVAIKKI NAFDN +DA+RTLREIKLL HM+H+NVI IKDII  P+K+ F DVYIVYELMDTDLHQI+RS Q
Sbjct:   10 LTYDGRYVMYNVLGNIFELSSKYIPPIEPIGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRSTQ 129

HSP 2 Score: 40.4318 bits (93), Expect = 7.368e-55
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFLYQ+LRG +Y+H
Sbjct:  134 DHCQYFLYQILRGLKYIH 151
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.869e-50
Identity = 82/120 (68.33%), Postives = 102/120 (85.00%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            +THGG+Y+ Y+++GN FEV++KY PPI PIGRGAYGIVC+ +N ETRE VAIKKI NAF+N +DA+RTLREIKLLRH++HEN+I I+D+I PP    FNDVYI  ELMDTDLH I+RS+Q
Sbjct:   13 MTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQ 132

HSP 2 Score: 38.891 bits (89), Expect = 3.869e-50
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  137 EHCQYFLYQILRGLKYIH 154
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 3.869e-50
Identity = 82/120 (68.33%), Postives = 102/120 (85.00%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            +THGG+Y+ Y+++GN FEV++KY PPI PIGRGAYGIVC+ +N ETRE VAIKKI NAF+N +DA+RTLREIKLLRH++HEN+I I+D+I PP    FNDVYI  ELMDTDLH I+RS+Q
Sbjct:   13 MTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQ 132

HSP 2 Score: 38.891 bits (89), Expect = 3.869e-50
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  137 EHCQYFLYQILRGLKYIH 154
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.455e-49
Identity = 79/119 (66.39%), Postives = 105/119 (88.24%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            THGG+++ Y+++G+LFE++SKY PPI PIGRGAYGIVC+ +++ET E VA+KKI NAFDN +DA+RTLREIKLLRH++HEN+IAI+D++ PP +  F+DVYI  ELMDTDLHQI+RS+Q
Sbjct:   16 THGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQ 134

HSP 2 Score: 39.6614 bits (91), Expect = 1.455e-49
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQLLRG +Y+H
Sbjct:  139 EHCQYFLYQLLRGLKYIH 156
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.400e-47
Identity = 78/120 (65.00%), Postives = 105/120 (87.50%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+H G+Y+QYN++G++FE+ +KY PPIRPIGRGA GIVC+AV+SET E+VAIKKI   FDN I+A+RTLREIKLLRH +HEN++AI+D+I PP++D+F DVYIV ELM+ DL++ ++SDQ
Sbjct:   37 LSHDGRYIQYNLFGHIFELPAKYKPPIRPIGRGACGIVCSAVDSETNEKVAIKKITQVFDNTIEAKRTLREIKLLRHFDHENIVAIRDVILPPQRDSFEDVYIVNELMEFDLYRTLKSDQ 156

HSP 2 Score: 33.113 bits (74), Expect = 8.400e-47
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH  YF+YQ+LRG +Y+H
Sbjct:  161 DHGMYFMYQILRGLKYIH 178
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.714e-44
Identity = 75/111 (67.57%), Postives = 97/111 (87.39%), Query Frame = 1 
Query:  304 YNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            Y+++ +LFE+ +KYVP I+PIGRGAYGIVC++VN ET E+VAIKKI NAF+N IDA RTLRE+KLLRH+ HENVIA+KD++ P ++ +F DVY+VYELMDTDLHQI++S Q
Sbjct:   19 YSMWQSLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIQRRSFKDVYLVYELMDTDLHQIIKSSQ 128

HSP 2 Score: 38.891 bits (89), Expect = 3.714e-44
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFL+QLLRG +Y+H
Sbjct:  133 DHCQYFLFQLLRGLKYLH 150
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.842e-44
Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 1 
Query:  289 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            GKY  Y+++  LFE+ +KYVP I+PIGRGAYGIVC+++N ET E+VAIKKI N FDN +DA RTLRE+KLLRH+ HENVIA+KDI+ P  + +F DVY+VYELMDTDLHQI++S Q
Sbjct:   15 GKYY-YSMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSPQ 128

HSP 2 Score: 38.891 bits (89), Expect = 4.842e-44
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFL+QLLRG +Y+H
Sbjct:  133 DHCQYFLFQLLRGLKYLH 150
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
MPK11_ARATH6.773e-5683.05Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
MMK1_MEDSA8.826e-5673.33Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MAPK_PEA2.549e-5572.50Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK13_ARATH7.368e-5576.67Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
MPK5_ORYSJ3.869e-5068.33Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI3.869e-5068.33Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK3_ARATH1.455e-4966.39Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK10_ARATH8.400e-4765.00Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MAPK_PETHY3.714e-4467.57Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
MPK3_ORYSJ4.842e-4466.38Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
back to top