FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9337 contig Ccv1_Contig9337:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.943e-14
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  424 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            VA+KKI   F   + A+RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 65          

HSP 2 Score: 31.187 bits (69), Expect = 2.943e-14
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ++RG +YVH
Sbjct:   74 QYFLYQIMRGLKYVH 88          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_GIBIN (Mitogen-activated protein kinase HOG1 (Fragment) OS=Gibberella intermedia GN=HOG1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.948e-14
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  424 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            VA+KKI   F   + A+RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 65          

HSP 2 Score: 31.187 bits (69), Expect = 2.948e-14
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ++RG +YVH
Sbjct:   74 QYFLYQIMRGLKYVH 88          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK04_HUMAN (Mitogen-activated protein kinase 4 OS=Homo sapiens GN=MAPK4 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.817e-14
Identity = 37/112 (33.04%), Postives = 68/112 (60.71%), Query Frame = 1
Query:  307 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD------TFNDVYIVYELMDTDLHQIV 624
            +VYG  +++  ++V   +P+G G  G+V +AV+S    +VA+KKI  A  +    +  LREIK++R ++H+N++ + +++ P   D       F+  YIV E M+TDL +++
Sbjct:   10 SVYG--YDLGGRFVD-FQPLGFGVNGLVLSAVDSRACRKVAVKKI--ALSDARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGTDLQGELFKFSVAYIVQEYMETDLARLL 116          

HSP 2 Score: 30.8018 bits (68), Expect = 4.817e-14
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +H + F+YQLLRG +Y+H
Sbjct:  124 EHAKLFMYQLLRGLKYIH 141          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14C_DROME (Putative mitogen-activated protein kinase 14C OS=Drosophila melanogaster GN=p38c PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.341e-14
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD--TFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++V+  +  +L+E    Y   +R +G G++G V       T    A+K++   F+   DA+ T REI+LL+HM H NVI++ ++  PP  +   F  VY+V  LMD DLH+  R    SDQ  R+I+
Sbjct:    3 EFVRVAINESLWEFPDIY-EFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIIL 128          

HSP 2 Score: 24.6386 bits (52), Expect = 6.341e-14
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  666 LYQLLRGFEYVH 701
            LYQ+LRG +Y+H
Sbjct:  128 LYQILRGLKYIH 139          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: YPC2_CAEEL (Putative serine/threonine-protein kinase C05D10.2 OS=Caenorhabditis elegans GN=C05D10.2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  364 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVR-----SDQH*RMIIVSTF 666
            +G+GAYGIV  A +  +RE VA+KKI +AF N  D++RT RE+  L+   +H NVI + +I R    D   D+Y+ +E M+ DLH +++      D H + I+   F
Sbjct:   19 LGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFREVMFLQEFGKHPNVIKLYNIFR---ADNDRDIYLAFEFMEADLHNVIKKGSILKDVHKQYIMCQLF 122          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.314e-13
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  307 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD------TFNDVYIVYELMDTDL 612
            +VYG  +++  +++   +P+G G  G+V +A +S    +VA+KKI     +    +  LREIK++R ++H+N++ + +++ P   D       F+  YIV E M+TDL
Sbjct:   10 SVYG--YDLGGRFID-FQPLGFGVNGLVLSATDSRACRKVAVKKI--VLSDARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDL 112          

HSP 2 Score: 32.3426 bits (72), Expect = 2.314e-13
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH + F+YQLLRG +Y+H
Sbjct:  124 DHAKLFMYQLLRGLKYIH 141          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 1.171e-11
Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  355 IRPIGRGAYGIVC---AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVR----------SDQH*RMII 654
            I  +G G++G V    A      R  VAIKK+   F +   ARR  RE KLL+ M H+N+I   DI  P +++ F DVY+V E     L+QI++          +D+H + II
Sbjct:  121 IEYLGGGSFGNVIKTSAVCRDGLRRYVAIKKMREPFFDPHHARRIFRETKLLQLMRHDNIICALDIYTPDEENDFRDVYVVTEFAGRSLYQILKQQRDYGRRVLTDEHIKFII 233          

HSP 2 Score: 25.7942 bits (55), Expect = 1.171e-11
Identity = 6/18 (33.33%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +H ++ +YQ++R  +Y+H
Sbjct:  227 EHIKFIIYQIIRALKYIH 244          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.397e-11
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  367 GRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD------TFNDVYIVYELMDTDL 612
            G G  G+V +A +S    +VA+KKI     +    +  LREIK++R ++H+N++ + +++ P   D       F+  YIV E M+TDL
Sbjct:    1 GCGGNGLVLSATDSRACRKVAVKKI--VLSDARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDL 86          

HSP 2 Score: 30.8018 bits (68), Expect = 4.397e-11
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +H + F+YQLLRG +Y+H
Sbjct:   98 EHAKLFMYQLLRGLKYIH 115          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: NLK_CAEBR (Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11
Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1
Query:  343 YVPPI------RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 576
            Y PP+      RPIG GA+G+V +  +  + + VA+KK+ N F N+   +R  REIK+L    H+NV+++ DI++P     F +
Sbjct:  201 YQPPVQDSQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 284          
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
HOG1_FUSCU2.943e-1447.83Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_GIBIN2.948e-1447.83Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
MK04_HUMAN4.817e-1433.04Mitogen-activated protein kinase 4 OS=Homo sapiens... [more]
MK14C_DROME6.341e-1435.43Putative mitogen-activated protein kinase 14C OS=D... [more]
YPC2_CAEEL1.833e-1339.25Putative serine/threonine-protein kinase C05D10.2 ... [more]
MK04_MOUSE2.314e-1331.48Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
PMK3_CAEEL1.171e-1136.28Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
MK04_RAT4.397e-1134.09Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]
NLK_CAEBR4.993e-1136.90Serine/threonine kinase NLK OS=Caenorhabditis brig... [more]

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Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
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