FC868491 | Citrus Genome Database

Overview


Name	FC868491
Unique Name	FC868491
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	702

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9337	contig	Ccv1_Contig9337:1..703.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14_MOUSE (Mitogen-activated protein kinase 14 OS=Mus musculus GN=Mapk14 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 5.429e-25
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1

Query:  322 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++EV  +Y   + P+G GAYG VCAA +++T   VA+KK+   F +II A+RT RE++LL+HM+HENVI + D+  P +  + FNDVY+V  LM  DL+ IV+    +D H + +I
Sbjct:   17 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131

HSP 2 Score: 31.9574 bits (71), Expect = 5.429e-25
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  125 DHVQFLIYQILRGLKYIH 142

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_ASHGO (Mitogen-activated protein kinase HOG1 OS=Ashbya gossypii GN=HOG1 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 7.037e-25
Identity = 46/113 (40.71%), Postives = 79/113 (69.91%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++ +  ++G +FE++++Y   + P+G GA+G+VC+AV++ T++ VAIKKI   F   + A+RT RE+KLL+H+ HEN+I ++DI   P      D+Y V EL  TDLH+++++
Sbjct:    6 EFYRTQIFGTVFEITNRYAD-LNPVGMGAFGLVCSAVDTYTQQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLEDIFLSP----LEDIYFVTELQGTDLHRLLQT 113

HSP 2 Score: 31.9574 bits (71), Expect = 7.037e-25
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  122 QYFLYQILRGLKYVH 136

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14_RAT (Mitogen-activated protein kinase 14 OS=Rattus norvegicus GN=Mapk14 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 7.065e-25
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1

Query:  322 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++EV  +Y   + P+G GAYG VCAA +++T   VA+KK+   F +II A+RT RE++LL+HM+HENVI + D+  P +  + FNDVY+V  LM  DL+ IV+    +D H + +I
Sbjct:   17 VWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131

HSP 2 Score: 31.9574 bits (71), Expect = 7.065e-25
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  125 DHVQFLIYQILRGLKYIH 142

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.195e-25
Identity = 49/113 (43.36%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VAIKKI   F   + A+RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDQLTSQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.187 bits (69), Expect = 9.195e-25
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ++RG +YVH
Sbjct:  119 QYFLYQIMRGLKYVH 133

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.196e-25
Identity = 49/113 (43.36%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VAIKKI   F   + A+RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.187 bits (69), Expect = 9.196e-25
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ++RG +YVH
Sbjct:  119 QYFLYQIMRGLKYVH 133

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_YEAST (Mitogen-activated protein kinase HOG1 OS=Saccharomyces cerevisiae GN=HOG1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.193e-24
Identity = 46/118 (38.98%), Postives = 80/118 (67.80%), Query Frame = 1

Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            +T   ++++  ++G +FE++++Y   + P+G GA+G+VC+A ++ T + VAIKKI   F   + A+RT RE+KLL+H+ HEN+I ++DI   P      D+Y V EL  TDLH+++++
Sbjct:    1 MTTNEEFIRTQIFGTVFEITNRY-NDLNPVGMGAFGLVCSATDTLTSQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLSP----LEDIYFVTELQGTDLHRLLQT 113

HSP 2 Score: 31.9574 bits (71), Expect = 1.193e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  122 QYFLYQILRGLKYVH 136

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.194e-24
Identity = 48/112 (42.86%), Postives = 75/112 (66.96%), Query Frame = 1

Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            +++  ++G  FE++S+YV  + P+G GA+G+VC+A +  T + VAIKKI   F   + A+RT RE+KLL+H+ HEN+I + DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    4 FIRTQIFGTCFEITSRYVD-LNPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENLITLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 1.194e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14_PANTR (Mitogen-activated protein kinase 14 OS=Pan troglodytes GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.197e-24
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1

Query:  322 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++EV  +Y   + P+G GAYG VCAA +++T   VA+KK+   F +II A+RT RE++LL+HM+HENVI + D+  P +  + FNDVY+V  LM  DL+ IV+    +D H + +I
Sbjct:   17 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131

HSP 2 Score: 31.9574 bits (71), Expect = 1.197e-24
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  125 DHVQFLIYQILRGLKYIH 142

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14_HUMAN (Mitogen-activated protein kinase 14 OS=Homo sapiens GN=MAPK14 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.197e-24
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1

Query:  322 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++EV  +Y   + P+G GAYG VCAA +++T   VA+KK+   F +II A+RT RE++LL+HM+HENVI + D+  P +  + FNDVY+V  LM  DL+ IV+    +D H + +I
Sbjct:   17 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131

HSP 2 Score: 31.9574 bits (71), Expect = 1.197e-24
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  125 DHVQFLIYQILRGLKYIH 142

[Close]

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK14_CANFA (Mitogen-activated protein kinase 14 OS=Canis familiaris GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.197e-24
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1

Query:  322 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            ++EV  +Y   + P+G GAYG VCAA +++T   VA+KK+   F +II A+RT RE++LL+HM+HENVI + D+  P +  + FNDVY+V  LM  DL+ IV+    +D H + +I
Sbjct:   17 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131

HSP 2 Score: 31.9574 bits (71), Expect = 1.197e-24
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  125 DHVQFLIYQILRGLKYIH 142

The following BLAST results are available for this feature:

BLAST of FC868491 vs. ExPASy Swiss-Prot

BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189


Match Name	E-value	Identity	Description
MK14_MOUSE	5.429e-25	44.83	Mitogen-activated protein kinase 14 OS=Mus musculu...	[more]
HOG1_ASHGO	7.037e-25	40.71	Mitogen-activated protein kinase HOG1 OS=Ashbya go...	[more]
MK14_RAT	7.065e-25	44.83	Mitogen-activated protein kinase 14 OS=Rattus norv...	[more]
HOG1_CHAGB	9.195e-25	43.36	Mitogen-activated protein kinase HOG1 OS=Chaetomiu...	[more]
HOG1_MAGGR	9.196e-25	43.36	Mitogen-activated protein kinase HOG1 OS=Magnaport...	[more]
HOG1_YEAST	1.193e-24	38.98	Mitogen-activated protein kinase HOG1 OS=Saccharom...	[more]
HOG1_ARXAD	1.194e-24	42.86	Mitogen-activated protein kinase hog1 OS=Arxula ad...	[more]
MK14_PANTR	1.197e-24	44.83	Mitogen-activated protein kinase 14 OS=Pan troglod...	[more]
MK14_HUMAN	1.197e-24	44.83	Mitogen-activated protein kinase 14 OS=Homo sapien...	[more]
MK14_CANFA	1.197e-24	44.83	Mitogen-activated protein kinase 14 OS=Canis famil...	[more]

Pages

Properties


Property Name	Value
Genbank description	C31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT