FC868491 | Citrus Genome Database

Overview


Name	FC868491
Unique Name	FC868491
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	702

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_MYCGR (Mitogen-activated protein kinase Hog1 OS=Mycosphaerella graminicola GN=Hog1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.027e-24
Identity = 47/113 (41.59%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VA+KKI   F   + ++RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTGQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.027e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_BLUGR (Mitogen-activated protein kinase HOG1 OS=Blumeria graminis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.027e-24
Identity = 47/113 (41.59%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A ++ T + VA+KKI   F   + ++RT RE+KLL+H+ HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDNLTGQNVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.027e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_PHANO (Mitogen-activated protein kinase HOG1 OS=Phaeosphaeria nodorum GN=HOG1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.027e-24
Identity = 47/113 (41.59%), Postives = 77/113 (68.14%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VAIKKI   F   + ++RT RE+KLL+H+ HEN+I++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTSQAVAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.027e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.027e-24
Identity = 46/113 (40.71%), Postives = 77/113 (68.14%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VA+KKI   F   + ++RT RE+KLL+H+ HEN+I++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.027e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_ALTBR (Mitogen-activated protein kinase HOG1 OS=Alternaria brassicicola GN=HOG1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.027e-24
Identity = 47/113 (41.59%), Postives = 77/113 (68.14%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VAIKKI   F   + ++RT RE+KLL+H+ HEN+I++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTSQAVAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.027e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.028e-24
Identity = 52/109 (47.71%), Postives = 78/109 (71.56%), Query Frame = 1

Query:  325 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVR----SDQH 639
            F VS  Y   +  IG GAYGIVC+A++  + ++VAIKKI + FD+ +   RTLRE+KLLR+  HEN+I+I DI +P   ++F++VY++ ELM+TD+H+++R    SD H
Sbjct:   10 FNVSDDY-EILDVIGEGAYGIVCSAIHKPSGQKVAIKKI-SPFDHSMFCLRTLREMKLLRYFNHENIISILDIQQPQDFESFSEVYLIQELMETDMHRVIRTQDLSDDH 116

HSP 2 Score: 33.113 bits (74), Expect = 2.028e-24
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYF+YQ+LR  + +H
Sbjct:  115 DHCQYFIYQILRALKAMH 132

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.627e-24
Identity = 45/113 (39.82%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++++  ++G +FE++++Y   + P+G GA+G+VC+A ++ T + VAIKKI   F   + A+RT RE+KLL+H+ HEN+I ++DI   P      D+Y V EL  TDLH+++++
Sbjct:    5 EFIRTQIFGTVFEITNRYTN-LNPVGMGAFGLVCSATDTLTSQPVAIKKIMKPFSTSVLAKRTYRELKLLKHLRHENLICLEDIFLSP----LEDIYFVTELQGTDLHRLLQT 112

HSP 2 Score: 31.9574 bits (71), Expect = 2.627e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  121 QYFLYQILRGLKYVH 135

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_TORDE (Mitogen-activated protein kinase HOG1 OS=Torulaspora delbrueckii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.629e-24
Identity = 45/113 (39.82%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++++  V+G +FE++++Y   + P+G GA+G+VC+A ++  ++ VAIKKI   F   + A+RT RE+KLL+H+ HEN+I ++DI   P      D+Y V EL  TDLH+++++
Sbjct:    6 EFIRTQVFGTVFEITNRYTD-LNPVGMGAFGLVCSATDTLAQQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLSP----LEDIYFVTELQGTDLHRLLQT 113

HSP 2 Score: 31.9574 bits (71), Expect = 2.629e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  122 QYFLYQILRGLKYVH 136

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_HORWE (Mitogen-activated protein kinase HOG1 OS=Hortaea werneckii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.638e-24
Identity = 46/113 (40.71%), Postives = 77/113 (68.14%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A +  T + VA+KKI   F   + ++RT RE+KLL+H+ HEN+I + DI   P      D+Y+V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTSQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIICLSDIFISP----LEDMYVVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.638e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_BOTFB (Mitogen-activated protein kinase hog1 OS=Botryotinia fuckeliana (strain B05.10) GN=hog1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.638e-24
Identity = 47/113 (41.59%), Postives = 78/113 (69.03%), Query Frame = 1

Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++V+  ++G  FE++S+Y   ++P+G GA+G+VC+A ++ T   VA+KKI   F   + ++RT RE+KLL+H++HENVI++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDNLTGSNVAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 110

HSP 2 Score: 31.9574 bits (71), Expect = 2.638e-24
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +YVH
Sbjct:  119 QYFLYQILRGLKYVH 133

The following BLAST results are available for this feature:

BLAST of FC868491 vs. ExPASy Swiss-Prot

BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189


Match Name	E-value	Identity	Description
HOG1_MYCGR	2.027e-24	41.59	Mitogen-activated protein kinase Hog1 OS=Mycosphae...	[more]
HOG1_BLUGR	2.027e-24	41.59	Mitogen-activated protein kinase HOG1 OS=Blumeria ...	[more]
HOG1_PHANO	2.027e-24	41.59	Mitogen-activated protein kinase HOG1 OS=Phaeospha...	[more]
HOG1_COCHE	2.027e-24	40.71	Mitogen-activated protein kinase HOG1 OS=Cochliobo...	[more]
HOG1_ALTBR	2.027e-24	41.59	Mitogen-activated protein kinase HOG1 OS=Alternari...	[more]
MAPK2_PNECA	2.028e-24	47.71	Mitogen-activated protein kinase 2 OS=Pneumocystis...	[more]
HOG1_KLULA	2.627e-24	39.82	Mitogen-activated protein kinase HOG1 OS=Kluyverom...	[more]
HOG1_TORDE	2.629e-24	39.82	Mitogen-activated protein kinase HOG1 OS=Torulaspo...	[more]
HOG1_HORWE	2.638e-24	40.71	Mitogen-activated protein kinase HOG1 OS=Hortaea w...	[more]
HOG1_BOTFB	2.638e-24	41.59	Mitogen-activated protein kinase hog1 OS=Botryotin...	[more]

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Properties


Property Name	Value
Genbank description	C31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT