FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 6.886e-82
Identity = 151/205 (73.66%), Postives = 177/205 (86.34%), Query Frame = 1
Query:   79 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            KER+  VYLA+L+EQAERY+EMVE+MK VAKL+V+LTVEERNL+SVGYK+VIG+RRASWRI SSIEQKE  KGN+ NVKRIKEY ++VE EL+ IC DI+SV+DEHLIPS++ GESTVF+ KMKGDYYRYLAEFK  ++RKEAAD SLK          ++LPPTHPIRLGLALNFSVFYY  +N+PERACHLAKQAFDEAI+EL
Sbjct:    5 KERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRRASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISEL 209          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.199e-79
Identity = 151/209 (72.25%), Postives = 176/209 (84.21%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M  +RE  VY+A+LAEQAERYDEMVE MKKVAKL  D EL+VEERNL+SV YK+VIGARRASWRI+SSIEQKEEAKGNE++V+RI++YR  VE+EL+KIC  IL ++D+HLIP++++GES VFY KMKGDY+RYLAEFK   DRKEAA+H+L            +LPPTHPIRLGLALNFSVFYY  LNSPERACHLAKQAFDEAIAEL
Sbjct:    1 MAVDREECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEL 209          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.073e-78
Identity = 148/203 (72.91%), Postives = 171/203 (84.24%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMVEAMKKVA+LDVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE+KGNE +VK+IKEY+ +VE EL  ICNDIL V++ HLI SS SGES VFYYKMKGDY+RYLAEF   + RK +A+ SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC+LAK AFD+AIAEL
Sbjct:    3 REENVYMAKLAEQAERYEEMVEAMKKVAELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAEL 205          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77
Identity = 147/204 (72.06%), Postives = 168/204 (82.35%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 5.107e-77
Identity = 145/204 (71.08%), Postives = 171/204 (83.82%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ERE++VY A+LAEQAERYDEMVEAMKKVA +DVELTVEERNL+SV YK+VIGARRASWRI++SIEQKEE KG E+ ++ IK YR +VE EL  IC+DIL+V+++HLIP +TSGES VFYYKMKGDY+RYLAEF    DRK+AA++SL           ++LPPTHPIRLGLALNFSVFYY  LNSP+RAC LAK AFD+AIAEL
Sbjct:    3 ERENNVYKAKLAEQAERYDEMVEAMKKVASMDVELTVEERNLLSVAYKNVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDILNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 206          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14339_ARATH6.886e-8273.6614-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
1433_CHLRE3.199e-7972.2514-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433_DICDI2.073e-7872.9114-3-3-like protein OS=Dictyostelium discoideum GN... [more]
1433E_SHEEP3.910e-7772.0614-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT3.910e-7772.0614-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE3.910e-7772.0614-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN3.910e-7772.0614-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK3.910e-7772.0614-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]
1433E_BOVIN3.910e-7772.0614-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2... [more]
1433E_DROME5.107e-7771.0814-3-3 protein epsilon OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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