FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 5.646e-76
Identity = 145/207 (70.05%), Postives = 168/207 (81.16%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE  VYLA+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YK+VIGARRASWRI+SSIEQKEEAKGNE  V  I++YR ++E EL+KIC DILSV+ +HLI S+ +GES VFYYKMKGDY+RYLAEF  A+ RKEAAD SL+          +ELPPTHPIRLGLALNFSVFYY  LNSP+RACHLAKQAFD+A+A+L
Sbjct:    1 MPASREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADL 207          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.374e-76
Identity = 143/202 (70.79%), Postives = 169/202 (83.66%), Query Frame = 1
Query:   88 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  VYLA+LAEQAERY+EMVE MK VA  D +LTVEERNL+SV YK+VIGARRASWRI++SIEQKEE+KGN   V  IKEYRQ++E+ELAKIC+DIL V+D+HLIPS+ SGES VFY+K+KGDY+RYLAEF   D RK++AD SL+          +ELPPTHPIRLGLALNFSVFYY  LN+P++ACHLAKQAFD+AIAEL
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAEL 205          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.242e-75
Identity = 144/209 (68.90%), Postives = 176/209 (84.21%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFK-GADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE +VY+A+LAEQAERY+EMVE M+KVAK+DVE LTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ ILS+++ HL+PS+++ ES VFY KMKGDY+RYLAEFK GA +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFD+AIAEL
Sbjct:    1 MADSREENVYMAKLAEQAERYEEMVEFMEKVAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAEL 209          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.098e-74
Identity = 139/207 (67.15%), Postives = 170/207 (82.13%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE+ VYLA+LAEQAERY+EMVE MKKVA  + +L+VEERNL+SV YK++IGARRASWRI+SSIEQKEE++GN +    IKEYR+++EDEL+ IC+D+LSV+++HLIP++T+GES VFYYKMKGDYYRYLAEF   +  KEAAD SL+          +ELPPT P+RLGLALNFSVFYY  L+SPE ACHLAKQ FDEAI+EL
Sbjct:    1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISEL 207          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.046e-74
Identity = 144/212 (67.92%), Postives = 173/212 (81.60%), Query Frame = 1
Query:   64 LNEMEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL-DV-ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++  E  RE +VY+A+LAEQAERY+EMVE M+KVAK  DV ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE  V  IKEYR R+E EL+KIC+ IL ++D HL+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    1 MSTAEATREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.285e-74
Identity = 141/203 (69.46%), Postives = 164/203 (80.79%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  VYLA+LAEQAERY+ MVE MK VA  D ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE+KGN   V+ IKEYRQ++E EL  IC DIL+V+++HLIP++ S ES VFYYKMKGDYYRYLAEF   + R+ +AD SL+          +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    6 REDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISEL 208          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.285e-74
Identity = 143/212 (67.45%), Postives = 173/212 (81.60%), Query Frame = 1
Query:   64 LNEMEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL-DV-ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++  E  RE +VY+A+LAEQAERY+EMVE M+KVAK  DV ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE  V  IKEYR R+E EL+KIC+ IL ++D HL+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFD+AIAEL
Sbjct:    1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.902e-74
Identity = 141/208 (67.79%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ IL ++D HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFDEAI+EL
Sbjct:    6 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISEL 213          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.902e-74
Identity = 141/208 (67.79%), Postives = 169/208 (81.25%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    6 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 213          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.177e-73
Identity = 140/210 (66.67%), Postives = 170/210 (80.95%), Query Frame = 1
Query:   70 EMEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            + E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    4 QAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 213          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
1433_CANAL5.646e-7670.0514-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433_TRIHA7.374e-7670.7914-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
14331_SOLTU6.242e-7568.9014-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
RAD25_SCHPO3.098e-7467.15DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433A_HORVU4.046e-7467.9214-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
RAD24_SCHPO5.285e-7469.46DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14336_ORYSJ5.285e-7467.4514-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
1433B_HORVU6.902e-7467.7914-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14335_ORYSJ6.902e-7467.7914-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14332_ORYSJ1.177e-7366.6714-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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