FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.474e-73
Identity = 139/208 (66.83%), Postives = 172/208 (82.69%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK+    EL+VEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIPS+++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    4 ESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 211          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.843e-73
Identity = 140/212 (66.04%), Postives = 171/212 (80.66%), Query Frame = 1
Query:   64 LNEMEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++  E  RE +VY+A+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    1 MSPAEPSREENVYMAKLAEQAERYEEMVEFMEKVARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.302e-72
Identity = 140/205 (68.29%), Postives = 171/205 (83.41%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE +GNE++V  IKEYR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ ++           ++L PTHPIRLGLALNFSVFYY  LNSP++AC+LAKQAFDEAI+EL
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISEL 207          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 2.900e-72
Identity = 140/208 (67.31%), Postives = 166/208 (79.81%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M + RE  VYLA+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YK+VIGARRASWRI+SSIEQKEE+K  +E  V+ I+ YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYY   NSP++ACHLAKQAFD+AIAEL
Sbjct:    1 MSQTREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAEL 208          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 2.900e-72
Identity = 139/208 (66.83%), Postives = 166/208 (79.81%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFDEAI+EL
Sbjct:    5 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 3.787e-72
Identity = 141/205 (68.78%), Postives = 170/205 (82.93%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE L+VEERNL+SV YK+VIGARRASWRI+SSIEQKEE+KGNE +V  IK+YR ++E EL+KIC+ IL+V++ HLIPS++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFD+AIAEL
Sbjct:    4 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAEL 208          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.787e-72
Identity = 139/208 (66.83%), Postives = 166/208 (79.81%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFDEAI+EL
Sbjct:    5 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.946e-72
Identity = 138/205 (67.32%), Postives = 168/205 (81.95%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMVE M+KV+      ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE++V  I+EYR ++E+EL+KIC+ IL ++D  LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.946e-72
Identity = 139/208 (66.83%), Postives = 173/208 (83.17%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL-DVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +  RE +VYLA+LAEQAERY+EM+E M+KVAK  DVE LTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E +L+KIC+ ILS+++ +LIPS+++ ES VF+ KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAI+EL
Sbjct:    3 DSSREENVYLAKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 210          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.437e-72
Identity = 140/208 (67.31%), Postives = 172/208 (82.69%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIP +++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNS +RAC+LAKQAFD+AIAEL
Sbjct:    3 ESTREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAEL 210          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
1433_MESCR4.474e-7366.8314-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433_LILLO5.843e-7366.0414-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14333_ORYSJ1.302e-7268.2914-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
BMH2_YEAST2.900e-7267.31Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
14332_MAIZE2.900e-7266.8314-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14333_ARATH3.787e-7268.7814-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14331_MAIZE3.787e-7266.8314-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433C_TOBAC4.946e-7267.3214-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14334_SOLLC4.946e-7266.8314-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433E_TOBAC8.437e-7267.3114-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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