FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.437e-72
Identity = 136/205 (66.34%), Postives = 167/205 (81.46%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  VYLA+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+KIC+ IL ++D  L+P+S +G+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:   11 REEFVYLAKLAEQAERYEEMVEFMEKVAEAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 215          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.102e-71
Identity = 137/205 (66.83%), Postives = 169/205 (82.44%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMV+ M+KV+      ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE++VK IKEYR ++E EL+ IC+ IL ++D +LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    3 REENVYMAKLAEQAERYEEMVQFMEKVSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 207          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 268.855 bits (686), Expect = 1.880e-71
Identity = 140/208 (67.31%), Postives = 164/208 (78.85%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE  VYLA+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YK+VIGARRASWRI+SSIEQKEE+K  +E  V+ I  YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYY   NSP++ACHLAKQAFD+AIAEL
Sbjct:    1 MSTSREDSVYLAKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAEL 208          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.880e-71
Identity = 139/205 (67.80%), Postives = 168/205 (81.95%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKV-AKLDVE-LTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE +VY+A+LAEQAERY+EMVE M+KV A  D E LTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  I++YR ++E EL+ IC+ IL ++D  LIPS++SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +ELPPTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVSANADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.455e-71
Identity = 138/209 (66.03%), Postives = 170/209 (81.34%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAK-LDV-ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE +VYLA+LAEQAERY+EMVE M+KVAK +D  ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GN+ +V  IK+YR ++E EL+KIC+ IL+++D HL+P+++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFDEAI+EL
Sbjct:    1 MSSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISEL 209          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.206e-71
Identity = 138/208 (66.35%), Postives = 163/208 (78.37%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL-DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE +VYLA+LAEQAERY+EMVE M+KV    D ELT+EERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IK YR ++E EL  ICN IL ++D  LI ++ +G+S VFY KMKGDYYRYLAEFK   +RKEAA+++L            EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    1 MASPREENVYLAKLAEQAERYEEMVEFMEKVVGAGDDELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 208          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 4.187e-71
Identity = 135/205 (65.85%), Postives = 166/205 (80.98%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            R+  VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+ IC+ IL ++D  L+P++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           SEL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:   10 RDEFVYMAKLAEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 214          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.469e-71
Identity = 138/209 (66.03%), Postives = 168/209 (80.38%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKV-AKLDV-ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE  VY+A+LAEQAERY+EMVE M+KV A +D  ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GN+ +V  I+EYR ++E EL+ IC+ IL ++D  LIP++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    1 MASGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 209          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.142e-71
Identity = 139/210 (66.19%), Postives = 165/210 (78.57%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE +VY+A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    1 MASPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 210          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.142e-71
Identity = 139/210 (66.19%), Postives = 165/210 (78.57%), Query Frame = 1
Query:   73 MEKEREHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            M   RE +VY+A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYY  LNSP+RAC+LAKQAFDEAIAEL
Sbjct:    1 MASPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 210          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14334_ARATH8.437e-7266.3414-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_SOLLC1.102e-7166.8314-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
BMH1_YEAST1.880e-7167.31Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
1433_PEA1.880e-7167.8014-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14337_ARATH2.455e-7166.0314-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433A_TOBAC3.206e-7166.3514-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14331_ARATH4.187e-7165.8514-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14332_ARATH5.469e-7166.0314-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14336_SOLLC7.142e-7166.1914-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU7.142e-7166.1914-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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