FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 5.119e-69
Identity = 134/208 (64.42%), Postives = 166/208 (79.81%), Query Frame = 1
Query:   76 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            +  RE +VYLA+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKE+++GN  +V  IK+YR ++E EL+KIC+ IL++++ HLIP+++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYY  LNS +RAC LAKQAFDEAI+EL
Sbjct:    4 DSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISEL 211          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.297e-66
Identity = 123/202 (60.89%), Postives = 163/202 (80.69%), Query Frame = 1
Query:   88 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            E  V+L++LAEQ+ERYDEMV+ MK+VA L+ EL+VEERNL+SV YK+VIG+RRASWRI++S+EQKE+AKGN+++V+ IK YR ++EDELAK C+D+L VI E+L+P++++ ES VFY KM+GDYYRY AEF   + R+E AD SL           ++L PTHPIRLGLALNFSVFYY  +N  ++AC LAKQAFD++IA+L
Sbjct:    2 EDCVFLSKLAEQSERYDEMVQYMKQVAALNTELSVEERNLLSVAYKNVIGSRRASWRIITSLEQKEQAKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFYYEIMNDADKACQLAKQAFDDSIAKL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.918e-66
Identity = 122/203 (60.10%), Postives = 161/203 (79.31%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  VY A+LAEQ+ERYDEMV+ MK+VA+++ EL++EERNL+SV YK+VIGA+RASWRI+SS+EQKE+AKGN+++V+ IK YR ++E EL+  C+D+L VI E+L+P +++ ES VF+ KM+GDYYRY AEF   + RKE AD SL           +EL PTHPIRLGLALNFSVFY+  +N  ++AC LAKQAFD+AIA+L
Sbjct:    4 REDCVYTAKLAEQSERYDEMVQCMKQVAEMEAELSIEERNLLSVAYKNVIGAKRASWRIISSLEQKEQAKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.541e-65
Identity = 126/206 (61.17%), Postives = 163/206 (79.13%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            R+ +VY+A+LAEQAERY+EMV+ M+++   A    ELTVEERNL+SV YK+VIG+ RA+WRI+SSIEQKEE++ NE++V  +K+YR +VE EL+ IC+ IL ++D HLIPS+T+ ES VFY KMKGDY+RYLAEFK  D+RK AA+ ++           ++L PTHPIRLGLALNFSVFYY  LNS E+AC +AKQAF+EAIAEL
Sbjct:    7 RDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65
Identity = 124/205 (60.49%), Postives = 161/205 (78.54%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV--ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  +YLA+LAEQAERY+EMV+ M ++  +    ELTVEERNL+SV YK+VIG+ RA+WRI+SSIEQKEE + NE++V  +K+YR +VE EL+ +C  IL ++D++LIPS+ +GES VFY KMKGDYYRYLAEFK  ++RKEAA+ ++           +EL PTHPIRLGLALN+SVFYY  LN+ E+AC +AKQAF+EAIAEL
Sbjct:    9 REQCLYLAKLAEQAERYEEMVKFMDRLVAVSASSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAEL 213          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65
Identity = 125/205 (60.98%), Postives = 161/205 (78.54%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKK--VAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  +YLA+LAEQAERY+EMV+ M K  +     ELTVEERNL+SV YK+VIG+ RA+WRI+SSIEQKEE + N+++V  +K+YR +VE EL+ +C  IL ++D++LIPS+++GES VFY KMKGDYYRYLAEFK  ++RKEAA+ ++           +EL PTHPIRLGLALNFSVFYY  LN+ E+AC +AKQAF+EAIAEL
Sbjct:    9 REQCLYLAKLAEQAERYEEMVKFMDKLVIGSGSSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAEL 213          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65
Identity = 124/206 (60.19%), Postives = 163/206 (79.13%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV---ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  +YLA+LAEQAERY+EMV+ M K+        ELTVEERNL+SV YK+VIG+ RA+WRI+SSIEQKEE++ NE++V  +KEYR +VE+EL+++C  IL +++ +L+PS+T+ ES VFY KMKGDYYRYLAEFK  D+RK+AA+ ++           ++LPPTHPIRLGLALNFSVFY+  LNS ++AC +AKQAF+EAIAEL
Sbjct:   11 REQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAEL 216          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14337_ORYSJ (14-3-3-like protein GF14-G OS=Oryza sativa subsp. japonica GN=GF14G PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64
Identity = 123/199 (61.81%), Postives = 155/199 (77.89%), Query Frame = 1
Query:   97 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            VY+A+LAEQAERYDEMVEAM  VAKLD  LT EERNL+SVGYK++IGA+RA+ RI+ SIE KEE KG E +V++  EYR++VE E+ KIC D++++ID++LIP S+  ES+VFYYKMKGDYYRYLAEFK   ++ E ++ SL           ++L PT PIRLGLALN SVFY   +NSP++AC LAK AFDEA+AEL
Sbjct:    8 VYMAKLAEQAERYDEMVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDKYLIPHSSGAESSVFYYKMKGDYYRYLAEFKTGTEKIEVSELSLNAYETASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAEL 206          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.796e-64
Identity = 120/206 (58.25%), Postives = 163/206 (79.13%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            R+ +VY+A+LAEQAERY+EMV+ M+++   A    ELTVEERNL+SV YK+VIG+ RA+WRI+SSIEQKEE++ N+++V  +K+YR +VE EL+ +C+ IL ++D HLIPS+ + ES VFY KMKGDY+RY+AEFK  D+RK AA+ ++           +++ PTHPIRLGLALNFSVFYY  LNS ++AC++AKQAF+EAIAEL
Sbjct:    7 RDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAEL 212          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.475e-64
Identity = 129/208 (62.02%), Postives = 154/208 (74.04%), Query Frame = 1
Query:   85 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV-----ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            RE  VY+A+LAEQAERY+EMVE M+KV          ELTVEERNL+SV YK+VIGARRASWRI+SSIEQKEE +G   +    + YR RVE EL+ IC  IL ++DE L+P++ + ++ VFY KMKGDY+RYLAEFK   +RK+AAD +L            EL PTHPIRLGLALNFSVFYY  LNSP+RAC LAKQAFDEAI+EL
Sbjct:   10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISEL 217          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14335_ARATH5.119e-6964.4214-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14333_ENTHI5.297e-6660.8914-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
14331_ENTHI6.918e-6660.1014-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14338_ARATH1.541e-6561.1714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
1433D_TOBAC5.856e-6560.4914-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14331_SOLLC5.856e-6560.9814-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
14310_SOLLC5.856e-6560.1914-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14337_ORYSJ2.225e-6461.8114-3-3-like protein GF14-G OS=Oryza sativa subsp. ... [more]
14336_ARATH3.796e-6458.2514-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_ORYSJ6.475e-6462.0214-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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