FC868500

Overview
NameFC868500
Unique NameFC868500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868500_ssr8 microsatellite FC868500_ssr8:8..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:16..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.546e-60
Identity = 118/204 (57.84%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.546e-60
Identity = 118/204 (57.84%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.325e-60
Identity = 115/199 (57.79%), Postives = 150/199 (75.38%), Query Frame = 1
Query:   97 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            V  A+LAEQAERYD+M  +MK V +  VEL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  GNE+  +  +EYR+++E EL +ICND+L +++++LIP+++  ES VFY KMKGDYYRYL+E    D ++   ++S K           E+ PTHPIRLGLALNFSVFYY  LN+PE+AC LAK AFDEAIAEL
Sbjct:    7 VQKAKLAEQAERYDDMAASMKAVTEGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNEKKQQMAREYREKIEAELQEICNDVLGLLEKYLIPNASQAESKVFYLKMKGDYYRYLSEVASGDSKRTTVENSQKAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNTPEQACSLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.325e-60
Identity = 117/204 (57.35%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+++  ES VFY KMKGDYYRYLAE    DD+K   + S +           E+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKNELVQKAKLAEQAERYDDMASCMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVEQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.325e-60
Identity = 116/204 (56.86%), Postives = 150/204 (73.53%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D++L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLGLLDKYLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVTCSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.343e-60
Identity = 118/204 (57.84%), Postives = 147/204 (72.06%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+ +  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNRSQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.408e-60
Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D  L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYY  LNSPE+AC LAK AFDEAIAEL
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.676e-60
Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = 1
Query:   82 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D  L+P++T  ES VFY KMKGDYYRYL+E    D ++E   +S +          SE+ PTHPIRLGLALNFSVFYY  LNSP++AC LAK AFDEAIAEL
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVANSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAKSAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 143B2_ONCMY (14-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.676e-60
Identity = 117/199 (58.79%), Postives = 147/199 (73.87%), Query Frame = 1
Query:   97 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAEL 693
            V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YK+V+GARR+SWR++SSIEQK E  GNE+     KEYR+++E EL  ICND+L ++D++LI ++T+ ES VFY KMKGDYYRYL+E    D +K   D+S +           E+ PTHPIRLGLALNFSVF+Y  LN+PE+AC LAK AFDEAIAEL
Sbjct:    7 VQKAKLAEQAERYDDMAGAMKSVTEQGGELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNEKKQAMAKEYREKIETELQDICNDVLGLLDKYLIANATAAESKVFYLKMKGDYYRYLSEVAAGDAKKTTVDNSQQAYQDAFDISKKEMQPTHPIRLGLALNFSVFFYEILNNPEKACTLAKTAFDEAIAEL 203          
BLAST of FC868500 vs. ExPASy Swiss-Prot
Match: 1433_EIMTE (14-3-3 protein OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.264e-59
Identity = 117/221 (52.94%), Postives = 155/221 (70.14%), Query Frame = 1
Query:   64 LNEMEKEREHHVYLARLAEQAERYDEMVEAMKKVAK--LDV----------ELTVEERNLVSVGYKDVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYY*DLNSPERACHLAKQAFDEAIAE 690
            + +++  RE HVY A+LAEQAERYDEM EAMK + +  LD           ELTVEERNL+SV YK+ +GARRASWRI+SS+EQKE  + +  N      YRQ+VE+EL KIC +IL+++ + L+P +T  ES VFY+KMKGDYYRY++EF   + +K +A+ + +          +ELP THPIRLGLALN+SVFYY  LN P++AC +AK AFD+AI E
Sbjct:    2 IEDIKTLREEHVYRAKLAEQAERYDEMAEAMKNLVENCLDQNNSPPGAKGDELTVEERNLLSVAYKNAVGARRASWRIISSVEQKEANRNHMANKALAASYRQKVENELNKICQEILTLLTDKLLPRTTDSESRVFYFKMKGDYYRYISEFSNEEGKKASAEQAEESYKRATDTAEAELPSTHPIRLGLALNYSVFYYEILNQPQKACEMAKLAFDDAITE 222          
The following BLAST results are available for this feature:
BLAST of FC868500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
1433Z_RAT2.546e-6057.8414-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_MOUSE2.546e-6057.8414-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
143B1_DANRE3.325e-6057.7914-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
1433Z_CHICK3.325e-6057.3514-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
1433B_XENTR3.325e-6056.8614-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
1433Z_SHEEP4.343e-6057.8414-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
143BA_XENLA7.408e-6056.8614-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]
143BB_XENLA9.676e-6056.3714-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]
143B2_ONCMY9.676e-6058.7914-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss... [more]
1433_EIMTE1.264e-5952.9414-3-3 protein OS=Eimeria tenella PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31001B07EF AbioticL1 Citrus clementina cDNA clone C31001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868500 ID=FC868500; Name=FC868500; organism=Citrus clementina; type=EST; length=695bp
AAAGCTCAGAGAGAGAGAGAGAGCGAGAGAAGGAAGAGAGCTAGCGAGAG
AAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATGTTT
ACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAA
GCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAG
GAATCTGGTGTCTGTTGGGTACAAGGATGTGATTGGGGCAAGAAGAGCAT
CATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAAT
GAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGA
GCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACCTAA
TCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAA
GGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAA
GGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAG
CAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTT
AACTTTTCTGTTTTCTACTACTGAGATTTGAACTCACCTGAGAGGGCTTG
CCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGA
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