FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51 Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 E + F+A+ ++ DLLRGI+ YGFEKPSAIQQR + PI+ G D I QAQSGTGKT+ + Q +D S Q L+L+PTRELA Q +KV LA+GD+ ++ HACVGG SV +D+ KL+ GVH+V GTPGRV DM+ + LR +KL +LDE+DEMLSRGFK QI+D+++ Sbjct: 28 EIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFK 199
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.498e-51 Identity = 98/184 (53.26%), Postives = 141/184 (76.63%), Query Frame = 3 Query: 129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEML--SRGFKDQIYDVY 671 K+ F+T++ ++ +F++M +KDDLLRGIY YGFE PSAIQ RA+ II G DVIAQAQSGTGKT+ + + Q +D +++QAL+LSPTRELA+Q +VV +GD++N+Q++A GGK++ +D+ +++ +G VVSGTPGRV DM KR L TR +++L+LDE+DE+L S GFK QIYD++ Sbjct: 10 KLKFKTSKKLKISPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIF 193
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.961e-50 Identity = 100/178 (56.18%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 153 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHAC---VGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ P +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +V+ IG+F++ A C VGG V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+ Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRF 198
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 99/178 (55.62%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 153 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHAC---VGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ P +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +V+ IG+F++ + C VGG V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+ Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRF 198
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 99/178 (55.62%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 153 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHAC---VGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ P +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +V+ IG+F++ + C VGG V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+ Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRF 198
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49 Identity = 89/170 (52.35%), Postives = 129/170 (75.88%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + FD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + V+ +IG ++N+ HA +GG S+ +DI + GV +V GTPGRV DMI+R+ RT +K+ +LDE+DEMLS GFK+QIY+++R Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDDIEAFKSGVQIVVGTPGRVFDMIERRYFRTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49 Identity = 89/170 (52.35%), Postives = 129/170 (75.88%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + SFD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + V+ IG ++N+ HA +GG S+ +DI + GV +V GTPGRV DMI+R+ RT +K+ ++DE+DEMLS GFK+QIY+++R Sbjct: 21 VYSFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENLKATQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFRTDKVKMFIMDEADEMLSSGFKEQIYNIFR 190
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49 Identity = 88/170 (51.76%), Postives = 128/170 (75.29%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + FD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + V+ +IG ++N+ HA +GG S+ +DI GV VV GTPGRV DMI+R+ +T +K+ ++DE+DEMLS GFK+QIY+++R Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFR 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49 Identity = 88/170 (51.76%), Postives = 129/170 (75.88%), Query Frame = 3 Query: 165 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + +FD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + V+ IG ++N+ HA +GG S+ +DI + GV +V GTPGRV DMI+R+ +T +K+ +LDE+DEMLS GFK+QIY+++R Sbjct: 22 VYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFKTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.293e-49 Identity = 90/171 (52.63%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 159 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVY 671 + + SFD + +K++LLRGI+ YGF +PSAIQQRA++PII+G+DV+AQAQSGTGKT ++ Q +D + Q LIL+PTRELA Q +KVV+A+ ++++ HAC+GG S+ ED L G ++ GTPGRV DMI R+ +T IK+ +LDE+DEMLS GFK+QIY+++ Sbjct: 19 KVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQEDSEALRGGAQIIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIF 189 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |