FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33 Identity = 74/169 (43.79%), Postives = 105/169 (62.13%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 SF+ +K +LL GI++ GFEKPS IQ+ ++ + GRDV+A+A++GTGKT+ + Q + ++QALIL PTRELA QT +VV +G + IQ GG S+ +DI +L VHV+ GTPGRV D+ R L V+DE+D+MLSR FK I + + Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGIQCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKMLSREFKGIIEQILEF 199
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: IF4A_ENCCU (ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi GN=TIF1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.476e-33 Identity = 76/173 (43.93%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 156 VEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 674 + +++ G+K+DLL+GIY GFE PS IQ+ A+ PII GRD+ AQAQSGTGKT A+ Q D S Q L+L+ TRE+A Q +G F+ + GG + D LE H+V GTPGRV MI L IKL V+DE+DEML GF++Q+ ++R Sbjct: 34 IRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFR 206
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 +F+ +K +LL GI++ GFEKPS +Q+ ++ + GRD++A+A++GTGKT+ + Q ++QALIL PTRELA QT +VV +G + +Q GG S+ +DI +L VHV+ GTPGRV D+ RK L V+DE+D+MLSR FK I + + Sbjct: 31 TFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQILAF 199
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 71/169 (42.01%), Postives = 104/169 (61.54%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 SF+ +K +LL GI++ GFEKPS IQ+ A+ I GRD++A+A++GTGKT+ + + + ++QALI+ PTRELA QT +V+ +G + GG ++ +DI +L VHV+ GTPGRV D+ RK L V+DE+D+MLSR FK I V + Sbjct: 32 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQVLTF 200
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 66/168 (39.29%), Postives = 110/168 (65.48%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 F+ +K DLL+GIY+ GFEKPS IQ+ ++ + G D++A+A++GTGKT + V + +D ++ +QA+IL PTRELA QT +V + ++NIQ GG S+ +DI +L VH++ GTPGR+ D+ K+ + +LV+DE+D++LS F+ + ++ ++ Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF 293
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 +F+ +K +LL GI++ GFEKPS IQ+ A+ I GRD++A+A++GTGKT+ + + V ++QALI+ PTRELA QT +VV +G I GG ++ +DI +L VH++ GTPGRV D+ RK L ++DE+D+MLSR FK I + + Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSF 215
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 +F+ +K +LL GI++ GFEKPS IQ+ A+ I GRD++A+A++GTGKT+ + + V ++QALI+ PTRELA QT +VV +G I GG ++ +DI +L VH++ GTPGRV D+ RK L ++DE+D+MLSR FK I + + Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSF 215
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 68/166 (40.96%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 668 +F+ +K +LL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+ + + V + ++QALI+ PTRELA QT +VV +G I GG ++ +DI +L VH++ GTPGRV D+ RK L ++DE+D+MLSR FK I + Sbjct: 35 TFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKMLSRDFKSIIEQI 200
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.637e-32 Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFK 650 SF+ +K +LL GI++ GFEKPS IQ+ A+ I G+D++A+A++GTGKT+ + + V ++QALI+ PTRELA QT +VV +G I GG ++ +DI +L VH++ GTPGRV D+ R+ L ++DE+D+MLSR FK Sbjct: 37 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKMLSRDFK 196
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: EXP9_STRR6 (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.749e-32 Identity = 66/162 (40.74%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 659 F+ + + DLL I + GF + S IQ++ + ++G+DVI QAQ+GTGKT+ L + + T +QAL+++PTRELA Q+++ + G ++ + GG S+ + I+ L+ G H+V GTPGR+ D+IKRK L+ + I+ L+LDE+DEML+ GF + I Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDI 164 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |