FC868508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 69/179 (38.55%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 TE V A F+ +K +LL GIY+ GFE+PS IQ+ ++ + G D++A+A++GTGKT+ + + +D +Q +IL PTRELA QT +V +G + IQ GG S+ +DI +L VH++ GTPGR+ D+ K+ + +LV+DE+D++LS F+ I ++ RY Sbjct: 115 TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRY 293
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = 3 Query: 171 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 +F+ ++ +LL GI++ GFE+PS IQ+ A+ + RD++A+A++GTGKT+ + + V ++QALI+ PTRELA QT +VV +G I GG ++ +DI +L VHV+ GTPGRV D+ RK L V+DE+D+MLSR FK + + + Sbjct: 30 TFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKSLVEQILSF 198
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31 Identity = 66/177 (37.29%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 147 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 T+G+E F+ G+K DLL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+ + +T++ ++Q LIL PTRELA QT +V +G + I GG ++ +DI +L+ VH+V GTPGR+ D+ + + ++DE+D++LS F I + ++ Sbjct: 33 TKGLE----FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQF 205
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.528e-30 Identity = 67/179 (37.43%), Postives = 108/179 (60.34%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 TE V A F+ +K +LL GIY+ GFE+PS IQ+ ++ + G D++A+A++GTGKT+ + + +D +Q +IL PTRELA QT +V +G + IQ GG S+ +DI +L VH++ GTPGR+ D+ K+ + +L++DE+D++LS F+ + + RY Sbjct: 125 TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY 303
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 66/179 (36.87%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 TE V A F+ +K +LL GIY+ GFE+PS IQ+ ++ + G D++A+A++GTGKT+ + + +D +Q +IL PTRELA QT +V +G ++NIQ GG S+ +DI +L VH++ GTPGR+ D+ ++ + +LV+DE+D++L+ F+ I + + Sbjct: 138 TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHF 316
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 70/179 (39.11%), Postives = 107/179 (59.78%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 TE V A T F+ +K +LL GI++ GFE PS IQ+ A+ + GRD++A+A++GTGKT+ + Q V+ ++QALI+ PTRELA QT +V +G + I+ GG ++ +DI +LE VHV+ GTPGRV D+ + + ++DE+D++LS F I V + Sbjct: 19 TEDVTATKGTGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGIKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADKLLSPDFTPIIEQVLHF 197
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 63/168 (37.50%), Postives = 103/168 (61.31%), Query Frame = 3 Query: 174 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677 F+ G+K DLL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+ + + ++ ++Q LIL PTRELA QT +V +G + I GG + +DI +L+ VH+V GTPGR+ D+ ++ + ++DE+D++LS F I + R+ Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSIEFTPVIEQLLRF 180
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 64/167 (38.32%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 147 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGF 647 T+G+E F+ IK +LL GI++ G+EKPS IQ+ A+ + GRD++A+A++GTGKT+ + + ++ + +VQ LIL PTRELA QT +V +G + I GG ++ +DI +L+ VH++ GTPGR+ D+ + + V+DE+D++LS F Sbjct: 44 TKGLE----FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGINVMVTTGGTTLRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLLSPEF 206
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30 Identity = 69/170 (40.59%), Postives = 107/170 (62.94%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGF 647 TE V A + F+ G++ +LL GIY GFE+PS IQ++A+ + GRD++A+A++GTGKT+ + ++TS +QALIL PTRELA QT +V +G I N+Q GG ++ +DI +L+ VH++ GTPGR+ D+ + + V+DE+D++LS F Sbjct: 27 TEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLLSEDF 196
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30 Identity = 69/170 (40.59%), Postives = 107/170 (62.94%), Query Frame = 3 Query: 147 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGF 647 TE V A + F+ G++ +LL GIY GFE+PS IQ++A+ + GRD++A+A++GTGKT+ + ++TS +QALIL PTRELA QT +V +G I N+Q GG ++ +DI +L+ VH++ GTPGR+ D+ + + V+DE+D++LS F Sbjct: 27 TEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDF 196 The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bpback to top |