FC868508

Overview
NameFC868508
Unique NameFC868508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.013e-66
Identity = 117/183 (63.93%), Postives = 154/183 (84.15%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            ++ F T++ V    +FD M +K++LLRGIY YGFE PSAIQ RA++ I KGRD IAQAQSGTGKT+  A+++ Q +DT+ RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG +VG+DIRKL+HG HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+D++L+RGF++QIYDVYRY
Sbjct:   12 RIEFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNVQCHACIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.947e-66
Identity = 117/183 (63.93%), Postives = 153/183 (83.61%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F+ M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT  RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL+HG HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RMEFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.120e-65
Identity = 115/178 (64.61%), Postives = 151/178 (84.83%), Query Frame = 3
Query:  144 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            T+E V A++SF+ M +K+DLLRGIY YG+E PSA+Q RA++ I KGRDVIAQAQSGTGKT+  ++ + Q++D S R+ QALILSPTRELA Q + VVLA+GD +N+Q HAC+GG SVG DI+KL++G HVVSGTPGRV DMI+R+ LRTR +K+L+LDE+DE+L++GFK+QIYD+YRY
Sbjct:   13 TSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRY 190          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.463e-65
Identity = 113/183 (61.75%), Postives = 155/183 (84.70%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F++M +K++LLRGIY YG+E PSA+Q RA++ + KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF++QIYDVYRY
Sbjct:   14 RMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRY 196          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 115/183 (62.84%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T+  V    +F  M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 115/183 (62.84%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T+  V    +F  M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_ASPTN (ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 115/183 (62.84%), Postives = 152/183 (83.06%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            +M F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  A+++ Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 RMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.495e-65
Identity = 114/183 (62.30%), Postives = 154/183 (84.15%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            K+ F T++ V    +F++M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF++QIYDVYRY
Sbjct:   13 KIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRY 195          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.495e-65
Identity = 115/183 (62.84%), Postives = 151/183 (82.51%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            KM F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  +++  Q +DT  RE QAL+LSPTRELATQ + V++A+GD++N+Q HAC+GG ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRY
Sbjct:   12 KMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRY 194          
BLAST of FC868508 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.495e-65
Identity = 114/183 (62.30%), Postives = 154/183 (84.15%), Query Frame = 3
Query:  129 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVVLAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 677
            K+ F T++ V    +F++M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VV+A+GD++N+Q HAC+GG +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF++QIYDVYRY
Sbjct:   14 KIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRY 196          
The following BLAST results are available for this feature:
BLAST of FC868508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_COCIM1.013e-6663.93ATP-dependent RNA helicase FAL1 OS=Coccidioides im... [more]
FAL1_AJECN2.947e-6663.93ATP-dependent RNA helicase FAL1 OS=Ajellomyces cap... [more]
FAL1_SCHPO1.120e-6564.61ATP-dependent RNA helicase fal1 OS=Schizosaccharom... [more]
FAL1_GIBZE1.463e-6561.75ATP-dependent RNA helicase FAL1 OS=Gibberella zeae... [more]
FAL1_SCLS11.910e-6562.84ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_BOTFB1.910e-6562.84ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]
FAL1_ASPTN1.910e-6562.84ATP-dependent RNA helicase fal1 OS=Aspergillus ter... [more]
FAL1_NEUCR2.495e-6562.30ATP-dependent RNA helicase fal-1 OS=Neurospora cra... [more]
FAL1_EMENI2.495e-6562.84ATP-dependent RNA helicase fal1 OS=Emericella nidu... [more]
FAL1_CHAGB2.495e-6562.30ATP-dependent RNA helicase FAL1 OS=Chaetomium glob... [more]

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Properties
Property NameValue
Genbank descriptionC31001C05EF AbioticL1 Citrus clementina cDNA clone C31001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868508 ID=FC868508; Name=FC868508; organism=Citrus clementina; type=EST; length=677bp
GCTCACCTGGAAGAGGAAACTCTCATTGATTCTTTGATTTCGAAGAGTAA
TTGTTGCGAATTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAG
AGGAGGGGGCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGG
AAGGAGTGGAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGAT
CTGTTGCGTGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACA
ACAGAGGGCCGTTATGCCGATTATAAAGGGCCGTGATGTAATTGCACAGG
CCCAGTCTGGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAG
ACGGTCGATACTTCTAGCAGAGAGGTGCAGGCGTTGATTTTGTCACCTAC
GAGGGAGCTGGCGACGCAGACAGAGAAAGTGGTTTTGGCAATTGGTGATT
TTATTAACATACAAGCACATGCGTGTGTTGGAGGCAAAAGTGTCGGGGAA
GATATTAGGAAGTTAGAGCATGGAGTTCATGTGGTGTCTGGAACTCCGGG
TAGAGTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATTA
AATTATTGGTGCTTGATGAGTCTGATGAGATGCTGAGCAGAGGGTTCAAG
GATCAAATTTATGATGTGTACCGTTAT
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